Os10g0545400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Nucleic acid-binding, OB-fold domain containing protein.
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Os10g0545400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Nucleic acid-binding, OB-fold domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 140.93 | 0.558 | 6.81 | 1.66 | 1.71 | -0.475 | 0.0652 | -0.643 | 0.246 | 20.8 | 24.5 | 223 | -- | -- |
| 142.8 | 0.557 | 6.81 | 1.57 | 1.72 | -0.489 | 0.0533 | -- | 0.22 | 20.8 | 24.6 | 213 | -- | -- |
| 140.94 | 0.553 | 6.81 | 1.66 | 1.71 | -0.475 | -- | -0.646 | 0.246 | 20.8 | 24.5 | 222 | -- | -- |
| 142.39 | 0.556 | 6.83 | 1.46 | 1.71 | -0.51 | -- | -- | 0.173 | 20.8 | 24.53 | 217 | -- | -- |
| 268.22 | 0.763 | 6.75 | 1.81 | -- | -1.1 | -- | -1.12 | 0.291 | -- | 26.1 | 605 | -- | -- |
| 156.79 | 0.587 | 6.78 | 1.63 | 1.86 | -- | 0.182 | -- | 0.444 | 20.2 | -- | -- | -- | -- |
| 156.89 | 0.587 | 6.78 | 1.62 | 1.86 | -- | -- | -- | 0.444 | 20.2 | -- | -- | -- | -- |
| 257.58 | 0.747 | 6.84 | 1.22 | -- | -1.32 | -- | -- | -0.079 | -- | 25.28 | 578 | -- | -- |
| 170.38 | 0.608 | 6.89 | -- | 1.86 | -1.14 | -- | -- | -0.0821 | 20.2 | 20.52 | 47520 | -- | -- |
| 347.94 | 0.872 | 6.73 | 1.61 | -- | -- | -- | -- | 0.423 | -- | -- | -- | -- | -- |
| 226.3 | 0.704 | 6.82 | -- | 1.85 | -- | -- | -- | 0.263 | 20.3 | -- | -- | -- | -- |
| 295.33 | 0.8 | 6.88 | -- | -- | -1.52 | -- | -- | -0.284 | -- | 25.3 | 588 | -- | -- |
| 416.23 | 0.952 | 6.77 | -- | -- | -- | -- | -- | 0.244 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 129.28 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 3 | 130.98 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 19 |
| 38 | 136.32 | wind | 5.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 44 | 136.67 | wind | 5.0 | 270 | < th | dose independent | rect. | 7 | 21 |
| 48 | 136.82 | wind | 9.0 | 90 | < th | dose dependent | rect. | 9 | 19 |
| 49 | 137.05 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 21 |
| 54 | 137.14 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 19 |
| 55 | 137.24 | wind | 7.0 | 10 | < th | dose independent | rect. | 9 | 20 |
| 74 | 137.81 | wind | 5.0 | 270 | < th | dose independent | rect. | 8 | 6 |
| 75 | 137.81 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 91 | 138.21 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 19 |
| 99 | 138.30 | wind | 5.0 | 270 | < th | dose independent | rect. | 22 | 15 |
| 106 | 138.46 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 107 | 138.48 | wind | 7.0 | 270 | < th | dose dependent | rect. | 8 | 6 |
| 109 | 138.52 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 13 |
| 115 | 138.57 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 138 | 138.86 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 141 | 138.89 | wind | 9.0 | 10 | < th | dose dependent | rect. | 9 | 20 |
| 150 | 138.96 | humidity | 60.0 | 10 | > th | dose independent | rect. | 5 | 13 |
| 157 | 139.05 | temperature | 25.0 | 90 | > th | dose independent | rect. | 9 | 21 |
| 159 | 139.08 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 17 |
| 194 | 139.46 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 9 | 7 |
| 195 | 139.47 | temperature | 25.0 | 10 | > th | dose independent | rect. | 9 | 7 |
| 199 | 139.56 | humidity | 60.0 | 10 | > th | dose independent | rect. | 5 | 15 |
| 201 | 139.57 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 209 | 139.61 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 17 |
| 210 | 139.62 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 13 |
| 212 | 139.63 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 5 | 19 |
| 249 | 139.98 | humidity | 60.0 | 10 | > th | dose independent | rect. | 5 | 17 |
| 255 | 140.03 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 4 | 6 |
| 271 | 140.14 | wind | 9.0 | 270 | < th | dose dependent | rect. | 22 | 15 |
| 274 | 140.18 | temperature | 25.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 287 | 140.24 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 7 |
| 292 | 140.28 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 4 | 10 |
| 293 | 140.29 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 15 |
| 294 | 140.29 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 4 | 13 |
| 301 | 140.33 | radiation | 30.0 | 90 | < th | dose independent | rect. | 4 | 7 |
| 313 | 140.41 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 19 |
| 320 | 140.44 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 327 | 140.46 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 13 |
| 334 | 140.49 | temperature | 15.0 | 90 | > th | dose independent | rect. | 9 | 19 |
| 338 | 140.52 | radiation | 30.0 | 10 | < th | dose independent | rect. | 5 | 5 |
| 360 | 140.66 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 371 | 140.75 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 382 | 140.78 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 391 | 140.82 | radiation | 10.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 392 | 140.82 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 8 |
| 398 | 140.87 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 7 |
| 403 | 140.90 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 5 | 5 |
| 418 | 140.94 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 439 | 141.05 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 4 | 7 |
| 441 | 141.06 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 17 |
| 447 | 141.08 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 13 |
| 454 | 141.10 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 463 | 141.12 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 7 |
| 473 | 141.15 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 479 | 141.17 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 13 |
| 482 | 141.19 | radiation | 1.0 | 10 | > th | dose independent | sin | 9 | NA |
| 485 | 141.19 | radiation | 1.0 | 10 | < th | dose dependent | sin | 9 | NA |
| 502 | 141.25 | humidity | 90.0 | 90 | < th | dose independent | rect. | 9 | 7 |
| 513 | 141.30 | temperature | 25.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 522 | 141.33 | humidity | 70.0 | 10 | > th | dose independent | rect. | 5 | 7 |
| 528 | 141.34 | radiation | 30.0 | 90 | < th | dose independent | rect. | 4 | 20 |
| 541 | 141.39 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 17 |
| 544 | 141.40 | temperature | 25.0 | 10 | < th | dose dependent | sin | 21 | NA |
| 558 | 141.43 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 4 | 7 |
| 562 | 141.43 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 5 |
| 564 | 141.44 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 565 | 141.44 | radiation | 30.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 574 | 141.46 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 584 | 141.49 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 608 | 141.60 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 2 |
| 610 | 141.60 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 612 | 141.61 | wind | 7.0 | 10 | < th | dose independent | rect. | 9 | 7 |
| 615 | 141.62 | temperature | 15.0 | 270 | > th | dose independent | rect. | 22 | 15 |
| 630 | 141.65 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 639 | 141.67 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 2 |
| 641 | 141.68 | wind | 3.0 | 1440 | > th | dose independent | rect. | 7 | 4 |
| 653 | 141.72 | radiation | 20.0 | 10 | > th | dose independent | rect. | 9 | 8 |
| 699 | 141.78 | temperature | 25.0 | 270 | < th | dose independent | rect. | 9 | 22 |
| 719 | 141.83 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 790 | 141.98 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 15 |
| 791 | 141.99 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 2 |
| 793 | 141.99 | temperature | 25.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 800 | 142.01 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 802 | 142.01 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 809 | 142.04 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 17 |
| 853 | 142.13 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 21 |
| 858 | 142.14 | radiation | 1.0 | 10 | < th | dose independent | sin | 9 | NA |
| 861 | 142.14 | humidity | 70.0 | 10 | > th | dose independent | rect. | 5 | 5 |
| 869 | 142.16 | wind | 7.0 | 1440 | < th | dose dependent | rect. | 8 | 3 |
| 878 | 142.19 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 16 |
| 887 | 142.20 | wind | 5.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 908 | 142.23 | wind | 3.0 | 1440 | < th | dose independent | rect. | 7 | 4 |
| 926 | 142.26 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 2 |
| 950 | 142.31 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 972 | 142.37 | wind | 5.0 | 4320 | > th | dose independent | rect. | 9 | 1 |