Os10g0545300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, CCHC-type domain containing protein.
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Os10g0545300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, CCHC-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9.08 | 0.142 | 11.4 | 0.161 | 0.156 | 0.367 | -0.0394 | -0.713 | -0.092 | 15.7 | 29.7 | 391 | -- | -- |
| 9.13 | 0.141 | 11.4 | 0.233 | 0.143 | 0.304 | -0.0666 | -- | -0.0955 | 15.7 | 29.57 | 390 | -- | -- |
| 9.09 | 0.14 | 11.4 | 0.158 | 0.156 | 0.368 | -- | -0.745 | -0.0922 | 15.7 | 29.7 | 390 | -- | -- |
| 9.13 | 0.141 | 11.4 | 0.229 | 0.148 | 0.288 | -- | -- | -0.0931 | 15.7 | 29.5 | 390 | -- | -- |
| 9.88 | 0.146 | 11.4 | 0.18 | -- | 0.386 | -- | -0.286 | -0.121 | -- | 29.39 | 387 | -- | -- |
| 10.93 | 0.155 | 11.4 | 0.272 | 0.265 | -- | 0.0664 | -- | -0.0909 | 16.5 | -- | -- | -- | -- |
| 10.94 | 0.155 | 11.4 | 0.273 | 0.266 | -- | -- | -- | -0.0905 | 16.5 | -- | -- | -- | -- |
| 9.73 | 0.145 | 11.4 | 0.208 | -- | 0.34 | -- | -- | -0.128 | -- | 28.66 | 392 | -- | -- |
| 10.46 | 0.151 | 11.4 | -- | 0.123 | 0.327 | -- | -- | -0.128 | 15.2 | 29.47 | 419 | -- | -- |
| 14.71 | 0.179 | 11.4 | 0.262 | -- | -- | -- | -- | -0.0975 | -- | -- | -- | -- | -- |
| 12.9 | 0.168 | 11.4 | -- | 0.261 | -- | -- | -- | -0.121 | 16.6 | -- | -- | -- | -- |
| 10.86 | 0.154 | 11.4 | -- | -- | 0.36 | -- | -- | -0.153 | -- | 28.7 | 392 | -- | -- |
| 16.52 | 0.19 | 11.4 | -- | -- | -- | -- | -- | -0.127 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 7.85 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 17 |
| 3 | 7.97 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 9 | 8.07 | wind | 7.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 16 | 8.17 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 19 | 8.21 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 5 |
| 23 | 8.23 | humidity | 70.0 | 270 | > th | dose independent | rect. | 8 | 18 |
| 30 | 8.26 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 19 |
| 33 | 8.28 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 44 | 8.31 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 17 | 10 |
| 48 | 8.33 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 63 | 8.36 | radiation | 1.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 77 | 8.41 | radiation | 1.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 81 | 8.41 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 87 | 8.44 | temperature | 15.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 94 | 8.45 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 96 | 8.45 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 12 | 7 |
| 118 | 8.48 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 124 | 8.48 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 127 | 8.49 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 131 | 8.49 | wind | 7.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 136 | 8.50 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 141 | 8.51 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 7 |
| 147 | 8.52 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 15 |
| 150 | 8.52 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 164 | 8.54 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 9 |
| 168 | 8.54 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 175 | 8.55 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 17 |
| 181 | 8.55 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 20 |
| 197 | 8.57 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 198 | 8.57 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 199 | 8.57 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 201 | 8.57 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 203 | 8.58 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 6 |
| 204 | 8.58 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 7 |
| 205 | 8.58 | wind | 7.0 | 270 | < th | dose independent | rect. | 12 | 7 |
| 208 | 8.58 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 211 | 8.58 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 213 | 8.58 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 11 | 16 |
| 214 | 8.59 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 226 | 8.60 | wind | 1.0 | 10 | > th | dose independent | rect. | 4 | 16 |
| 261 | 8.63 | humidity | 70.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 278 | 8.64 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 18 |
| 285 | 8.64 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 286 | 8.65 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 287 | 8.65 | radiation | 30.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 294 | 8.65 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 336 | 8.69 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 338 | 8.69 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 339 | 8.69 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 341 | 8.69 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 342 | 8.69 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 363 | 8.69 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 17 |
| 375 | 8.69 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 8 | 17 |
| 376 | 8.69 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 17 |
| 384 | 8.70 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 387 | 8.70 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 7 |
| 388 | 8.70 | wind | 1.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 393 | 8.70 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 7 |
| 398 | 8.70 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 411 | 8.71 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 8 | 5 |
| 422 | 8.72 | radiation | 1.0 | 270 | < th | dose dependent | sin | 15 | NA |
| 423 | 8.72 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 7 |
| 426 | 8.72 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 4 | 16 |
| 430 | 8.73 | radiation | 1.0 | 270 | > th | dose independent | sin | 15 | NA |
| 431 | 8.73 | radiation | 1.0 | 270 | < th | dose independent | sin | 15 | NA |
| 432 | 8.73 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 436 | 8.73 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 8 | 17 |
| 447 | 8.74 | radiation | 1.0 | 270 | > th | dose independent | rect. | 8 | 5 |
| 449 | 8.74 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 7 |
| 454 | 8.74 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 17 |
| 456 | 8.74 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 18 |
| 463 | 8.74 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 17 |
| 468 | 8.75 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 7 |
| 478 | 8.75 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 17 |
| 479 | 8.75 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 17 |
| 490 | 8.76 | temperature | 30.0 | 270 | < th | dose independent | rect. | 11 | 1 |
| 500 | 8.76 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 526 | 8.76 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 15 | 1 |
| 527 | 8.76 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 15 | 5 |
| 539 | 8.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 7 |
| 546 | 8.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 17 |
| 548 | 8.77 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 8 | 5 |
| 550 | 8.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 7 |
| 553 | 8.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 17 |
| 578 | 8.78 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 7 |
| 579 | 8.78 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 7 | 7 |
| 583 | 8.78 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 13 | 19 |
| 599 | 8.79 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 15 | 5 |
| 608 | 8.80 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 2 |
| 626 | 8.80 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 634 | 8.80 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 15 | 18 |
| 653 | 8.81 | temperature | 15.0 | 10 | > th | dose independent | rect. | 20 | 19 |
| 659 | 8.81 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 7 |
| 675 | 8.82 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 17 |
| 681 | 8.82 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 697 | 8.83 | wind | 7.0 | 30 | < th | dose independent | rect. | 15 | 5 |
| 714 | 8.83 | wind | 9.0 | 270 | < th | dose dependent | rect. | 13 | 5 |
| 733 | 8.84 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 17 |
| 734 | 8.84 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 17 |
| 744 | 8.84 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 7 |
| 794 | 8.86 | humidity | 60.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 811 | 8.86 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 17 |
| 834 | 8.87 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 840 | 8.87 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 859 | 8.88 | wind | 7.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 861 | 8.88 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 864 | 8.88 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 865 | 8.88 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 915 | 8.89 | temperature | 15.0 | 10 | > th | dose independent | rect. | 20 | 8 |
| 944 | 8.89 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 954 | 8.89 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 956 | 8.89 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 20 | 19 |
| 965 | 8.90 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 6 |
| 986 | 8.90 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 988 | 8.90 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 12 | 7 |