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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0545100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.16 (0.0177) R2 : 0.00125
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0282 (0.0373) R2dN8 : 0.00161 R2N8 : 0.00125
σ : 0.334
deviance : 51.11
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
47.72 0.325 3.17 0.134 0.16 -0.171 -0.0509 -1.02 0.0102 7.95 46.06 5900 -- --
49.19 0.327 3.17 0.0586 0.157 -0.19 -0.0528 -- -0.011 7.55 46.32 5764 -- --
47.72 0.322 3.17 0.13 0.16 -0.17 -- -1.02 0.0108 8 40.43 5901 -- --
49.17 0.327 3.17 0.0516 0.158 -0.199 -- -- -0.0138 8.17 31.39 5643 -- --
49.11 0.326 3.18 0.13 -- -0.175 -- -0.996 0.0112 -- 37 5839 -- --
49.7 0.33 3.16 0.038 0.158 -- -0.0642 -- 0.0301 7.85 -- -- -- --
49.71 0.33 3.16 0.0364 0.158 -- -- -- 0.0303 7.95 -- -- -- --
50.51 0.331 3.17 0.0538 -- -0.202 -- -- -0.0117 -- 35.65 5756 -- --
49.24 0.327 3.17 -- 0.16 -0.195 -- -- -0.0187 8.15 25.74 5637 -- --
51.07 0.334 3.16 0.0381 -- -- -- -- 0.0324 -- -- -- -- --
49.74 0.33 3.16 -- 0.158 -- -- -- 0.0263 7.93 -- -- -- --
50.59 0.331 3.17 -- -- -0.194 -- -- -0.0161 -- 33.69 5752 -- --
51.11 0.334 3.16 -- -- -- -- -- 0.0282 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 46.94 temperature 25.0 10 > th dose dependent rect. 6 1
3 46.96 radiation 10.0 30 < th dose independent rect. 6 1
4 46.97 atmosphere 1010.0 30 < th dose independent rect. 6 1
5 47.00 atmosphere 995.0 720 > th dose independent rect. 7 8
6 47.05 humidity 90.0 90 < th dose independent rect. 2 5
7 47.10 atmosphere 995.0 30 > th dose independent rect. 7 23
8 47.10 wind 1.0 30 > th dose dependent rect. 6 1
13 47.18 humidity 90.0 30 < th dose dependent rect. 6 1
18 47.27 temperature 15.0 720 > th dose independent rect. 7 8
20 47.31 humidity 90.0 90 < th dose dependent rect. 2 5
21 47.32 temperature 15.0 720 > th dose independent rect. 15 16
22 47.32 radiation 1.0 10 > th dose dependent rect. 6 1
23 47.33 temperature 15.0 720 > th dose independent rect. 3 16
25 47.34 temperature 15.0 720 > th dose independent rect. 19 8
26 47.34 atmosphere 1015.0 30 < th dose dependent rect. 6 1
28 47.37 radiation 20.0 30 < th dose dependent rect. 6 1
29 47.38 temperature 25.0 30 > th dose independent rect. 6 1
30 47.39 wind 9.0 720 < th dose independent rect. 19 8
32 47.40 temperature 15.0 90 > th dose independent rect. 7 23
34 47.41 temperature 25.0 10 > th dose dependent rect. 1 6
35 47.43 temperature 15.0 4320 > th dose independent rect. 7 1
40 47.45 atmosphere 1015.0 720 < th dose independent rect. 3 16
42 47.45 humidity 80.0 14400 < th dose dependent rect. 21 13
46 47.48 wind 7.0 1440 < th dose independent rect. 7 1
52 47.50 humidity 80.0 14400 < th dose dependent rect. 2 7
55 47.52 wind 1.0 10 > th dose independent rect. 6 1
57 47.52 temperature 30.0 720 < th dose independent rect. 19 8
58 47.52 humidity 50.0 720 > th dose independent rect. 19 8
59 47.52 atmosphere 995.0 720 > th dose independent rect. 19 8
60 47.52 radiation 1.0 720 < th dose independent rect. 19 8
68 47.52 radiation 1.0 720 < th dose dependent rect. 19 8
74 47.53 atmosphere 1015.0 720 < th dose independent rect. 7 8
76 47.54 radiation 40.0 720 < th dose independent rect. 15 16
79 47.55 radiation 40.0 1440 < th dose independent rect. 7 1
81 47.56 wind 9.0 720 < th dose independent rect. 15 16
86 47.58 atmosphere 1000.0 30 > th dose independent rect. 6 1
92 47.59 temperature 30.0 1440 < th dose independent rect. 7 1
96 47.59 humidity 50.0 1440 > th dose independent rect. 7 1
101 47.59 humidity 90.0 30 < th dose independent rect. 6 1
103 47.59 atmosphere 995.0 1440 > th dose independent rect. 7 1
105 47.59 atmosphere 1015.0 1440 < th dose independent rect. 7 1
106 47.59 temperature 10.0 1440 > th dose independent rect. 8 23
109 47.60 wind 5.0 30 < th dose independent rect. 6 1
112 47.60 temperature 10.0 30 > th dose independent rect. 6 1
114 47.60 temperature 30.0 30 < th dose independent rect. 6 1
115 47.60 humidity 50.0 30 > th dose independent rect. 6 1
126 47.60 precipitation 0.1 30 < th dose independent rect. 6 1
128 47.60 wind 5.0 14400 < th dose dependent rect. 11 1
130 47.60 precipitation 0.1 30 < th dose dependent rect. 6 1
133 47.61 radiation 1.0 30 > th dose independent rect. 6 1
138 47.62 temperature 15.0 720 > th dose independent rect. 5 16
148 47.66 temperature 15.0 720 > th dose independent rect. 17 16
153 47.68 humidity 50.0 30 > th dose dependent rect. 6 1
163 47.70 temperature 15.0 720 > th dose independent rect. 21 8
166 47.71 wind 3.0 14400 > th dose independent rect. 10 2
167 47.71 humidity 70.0 14400 < th dose independent rect. 8 2
168 47.71 wind 9.0 30 < th dose independent rect. 7 23
169 47.71 wind 9.0 30 < th dose dependent rect. 6 1
198 47.72 atmosphere 1000.0 10 > th dose independent rect. 10 20
207 47.74 humidity 70.0 14400 < th dose independent rect. 6 4
224 47.75 atmosphere 995.0 30 > th dose dependent rect. 6 1
228 47.76 precipitation 0.1 720 < th dose independent rect. 7 8
229 47.76 precipitation 0.1 14400 > th dose independent rect. 24 10
231 47.76 precipitation 0.1 720 < th dose dependent rect. 7 8
235 47.77 precipitation 0.1 14400 < th dose independent rect. 24 10
236 47.77 precipitation 0.1 14400 < th dose dependent rect. 24 10
238 47.78 wind 3.0 14400 < th dose independent rect. 10 2
245 47.78 atmosphere 1000.0 10 > th dose independent rect. 21 23
249 47.79 temperature 15.0 720 > th dose independent rect. 9 8
266 47.81 wind 7.0 14400 < th dose dependent rect. 10 5
270 47.82 wind 1.0 14400 > th dose dependent rect. 11 1
291 47.84 wind 3.0 14400 > th dose independent rect. 19 1
293 47.84 temperature 25.0 90 > th dose independent rect. 1 6
294 47.84 wind 5.0 14400 < th dose independent rect. 10 7
296 47.84 humidity 80.0 14400 < th dose independent rect. 3 11
306 47.85 humidity 70.0 1440 < th dose independent rect. 10 1
313 47.85 precipitation 0.1 14400 > th dose dependent rect. 24 10
320 47.86 humidity 80.0 14400 > th dose independent rect. 1 13
328 47.86 wind 1.0 14400 > th dose dependent rect. 10 5
333 47.87 humidity 80.0 14400 < th dose independent rect. 6 7
347 47.87 precipitation 0.1 14400 > th dose dependent rect. 5 7
349 47.87 temperature 25.0 10 > th dose dependent rect. 20 11
353 47.88 wind 5.0 14400 > th dose independent rect. 10 7
354 47.88 precipitation 0.1 14400 < th dose independent rect. 5 7
363 47.88 precipitation 0.1 14400 < th dose dependent rect. 5 7
368 47.89 humidity 70.0 1440 > th dose independent rect. 10 1
369 47.89 wind 5.0 14400 < th dose independent rect. 11 4
371 47.89 precipitation 0.1 14400 > th dose independent rect. 4 9
378 47.89 wind 3.0 14400 > th dose dependent rect. 9 8
400 47.90 humidity 70.0 14400 > th dose dependent rect. 8 1
434 47.92 precipitation 0.1 14400 > th dose independent sin 4 NA
435 47.92 precipitation 0.1 14400 < th dose independent sin 4 NA
440 47.92 radiation 1.0 720 < th dose independent rect. 21 8
448 47.92 precipitation 0.1 14400 < th dose dependent sin 4 NA
455 47.92 radiation 10.0 720 < th dose dependent rect. 21 8
458 47.93 wind 3.0 14400 < th dose independent rect. 19 1
465 47.93 precipitation 0.1 720 < th dose independent rect. 19 8
474 47.93 humidity 80.0 14400 < th dose dependent sin 8 NA
485 47.93 precipitation 0.1 720 < th dose dependent rect. 19 8
508 47.94 atmosphere 1000.0 720 > th dose independent rect. 21 14
525 47.95 precipitation 0.1 14400 < th dose independent rect. 5 4
536 47.95 precipitation 0.1 14400 < th dose dependent rect. 5 4
545 47.96 humidity 80.0 14400 < th dose independent sin 4 NA
553 47.96 temperature 30.0 720 < th dose independent rect. 21 8
554 47.96 humidity 50.0 720 > th dose independent rect. 21 8
557 47.96 atmosphere 995.0 720 > th dose independent rect. 21 8
601 47.98 humidity 90.0 720 > th dose independent rect. 3 1
632 47.99 humidity 80.0 14400 > th dose independent sin 4 NA
702 48.00 temperature 10.0 10 > th dose dependent rect. 8 22
721 48.01 temperature 30.0 30 < th dose dependent rect. 6 1
723 48.01 humidity 50.0 4320 > th dose dependent rect. 11 2
749 48.02 atmosphere 1015.0 720 < th dose independent rect. 9 8
758 48.02 radiation 40.0 720 < th dose independent rect. 17 16
766 48.02 atmosphere 1000.0 90 < th dose independent rect. 6 20
767 48.02 temperature 30.0 1440 < th dose independent rect. 14 21
808 48.03 temperature 30.0 1440 > th dose independent rect. 14 21
822 48.03 humidity 50.0 4320 > th dose dependent rect. 23 15
831 48.04 humidity 70.0 4320 > th dose independent rect. 8 10
837 48.04 atmosphere 1000.0 10 > th dose independent rect. 8 12
855 48.04 radiation 1.0 90 < th dose independent rect. 21 22
870 48.05 humidity 60.0 14400 < th dose independent rect. 11 1
914 48.05 humidity 50.0 4320 > th dose dependent rect. 2 13
943 48.06 precipitation 0.1 90 < th dose independent rect. 7 23
944 48.06 humidity 50.0 4320 > th dose dependent sin 4 NA
962 48.06 humidity 50.0 4320 > th dose dependent rect. 3 11
973 48.06 precipitation 0.1 90 < th dose dependent rect. 7 23
974 48.07 humidity 70.0 4320 > th dose independent sin 1 NA
991 48.07 humidity 90.0 720 < th dose independent rect. 1 6