Os10g0543800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glutathione S-transferase GST 11 (EC 2.5.1.18).
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Os10g0543800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glutathione S-transferase GST 11 (EC 2.5.1.18).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 122.24 | 0.519 | 2.94 | -0.322 | 0.275 | 4.81 | -0.825 | 8.35 | 0.25 | 5.89 | 8.777 | 20 | -- | -- |
| 124.27 | 0.519 | 2.91 | -0.38 | 0.282 | 3.09 | -0.879 | -- | 0.267 | 4.77 | 8.6 | 18 | -- | -- |
| 123.75 | 0.518 | 2.94 | -0.327 | 0.267 | 5.02 | -- | 9.25 | 0.252 | 6.27 | 8.7 | 18 | -- | -- |
| 125.6 | 0.522 | 2.92 | -0.388 | 0.286 | 2.85 | -- | -- | 0.251 | 6.13 | 8.7 | 18 | -- | -- |
| 127.42 | 0.526 | 2.95 | -0.327 | -- | 5.06 | -- | 9.84 | 0.254 | -- | 8.787 | 18 | -- | -- |
| 141.96 | 0.559 | 2.93 | -0.505 | 0.228 | -- | -0.448 | -- | 0.205 | 6.89 | -- | -- | -- | -- |
| 142.44 | 0.559 | 2.93 | -0.512 | 0.227 | -- | -- | -- | 0.206 | 7.32 | -- | -- | -- | -- |
| 129.37 | 0.53 | 2.92 | -0.377 | -- | 2.57 | -- | -- | 0.26 | -- | 8.803 | 19 | -- | -- |
| 129.13 | 0.529 | 2.9 | -- | 0.278 | 2.85 | -- | -- | 0.299 | 6.22 | 8.7 | 19 | -- | -- |
| 145.16 | 0.563 | 2.93 | -0.508 | -- | -- | -- | -- | 0.21 | -- | -- | -- | -- | -- |
| 149.33 | 0.572 | 2.91 | -- | 0.222 | -- | -- | -- | 0.263 | 7.47 | -- | -- | -- | -- |
| 132.96 | 0.537 | 2.91 | -- | -- | 2.87 | -- | -- | 0.306 | -- | 8.7 | 18 | -- | -- |
| 151.96 | 0.575 | 2.92 | -- | -- | -- | -- | -- | 0.266 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 121.07 | wind | 9 | 30 | > th | dose dependent | sin | 2 | NA |
| 5 | 121.83 | wind | 9 | 30 | > th | dose independent | rect. | 11 | 8 |
| 42 | 122.68 | wind | 9 | 30 | > th | dose independent | sin | 23 | NA |
| 74 | 123.41 | wind | 9 | 30 | > th | dose dependent | rect. | 11 | 8 |
| 227 | 124.06 | wind | 9 | 30 | > th | dose dependent | rect. | 17 | 21 |
| 233 | 124.10 | wind | 9 | 30 | > th | dose dependent | no | NA | NA |
| 274 | 124.10 | wind | 9 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 280 | 124.13 | wind | 9 | 30 | > th | dose independent | no | NA | NA |
| 321 | 124.13 | wind | 9 | 30 | > th | dose independent | rect. | 13 | 23 |
| 322 | 124.13 | wind | 9 | 30 | > th | dose independent | rect. | 15 | 23 |
| 323 | 124.13 | wind | 9 | 30 | > th | dose independent | rect. | 17 | 23 |
| 327 | 124.15 | wind | 9 | 30 | < th | dose independent | no | NA | NA |
| 328 | 124.19 | wind | 9 | 30 | > th | dose dependent | rect. | 11 | 3 |
| 356 | 124.51 | wind | 9 | 30 | > th | dose independent | rect. | 17 | 21 |
| 372 | 125.21 | wind | 9 | 30 | < th | dose independent | sin | 22 | NA |
| 399 | 125.79 | wind | 9 | 30 | > th | dose independent | rect. | 11 | 3 |
| 700 | 127.01 | wind | 9 | 30 | > th | dose independent | rect. | 17 | 19 |