Os10g0542800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Serine/threonine protein kinase domain containing protein.
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Os10g0542800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Serine/threonine protein kinase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.97 | 0.205 | 12.2 | 0.712 | 0.434 | 0.543 | 0.338 | -0.0467 | 0.451 | 20 | 80 | 1430 | -- | -- |
| 18.98 | 0.203 | 12.2 | 0.708 | 0.433 | 0.543 | 0.335 | -- | 0.451 | 20 | 80 | 1430 | -- | -- |
| 19.27 | 0.204 | 12.2 | 0.699 | 0.44 | 0.548 | -- | -0.00708 | 0.45 | 19.7 | 80.39 | 1467 | -- | -- |
| 19.27 | 0.204 | 12.2 | 0.698 | 0.44 | 0.548 | -- | -- | 0.45 | 19.7 | 80.01 | 1467 | -- | -- |
| 29.54 | 0.253 | 12.2 | 0.693 | -- | 0.588 | -- | 0.00453 | 0.445 | -- | 80.66 | 1414 | -- | -- |
| 22.54 | 0.223 | 12.2 | 0.699 | 0.449 | -- | 0.338 | -- | 0.419 | 19.9 | -- | -- | -- | -- |
| 22.87 | 0.224 | 12.2 | 0.69 | 0.45 | -- | -- | -- | 0.419 | 19.8 | -- | -- | -- | -- |
| 29.53 | 0.253 | 12.2 | 0.696 | -- | 0.589 | -- | -- | 0.449 | -- | 80.61 | 1414 | -- | -- |
| 31.78 | 0.263 | 12.2 | -- | 0.495 | 0.58 | -- | -- | 0.397 | 19.2 | 81.19 | 1674 | -- | -- |
| 33.84 | 0.272 | 12.2 | 0.685 | -- | -- | -- | -- | 0.413 | -- | -- | -- | -- | -- |
| 35.42 | 0.278 | 12.2 | -- | 0.445 | -- | -- | -- | 0.342 | 19.9 | -- | -- | -- | -- |
| 42.03 | 0.302 | 12.2 | -- | -- | 0.559 | -- | -- | 0.411 | -- | 81.09 | 2826 | -- | -- |
| 46.21 | 0.317 | 12.2 | -- | -- | -- | -- | -- | 0.337 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.65 | humidity | 60 | 1440 | > th | dose dependent | rect. | 12 | 16 |
| 13 | 18.74 | humidity | 80 | 1440 | > th | dose independent | rect. | 12 | 13 |
| 23 | 18.76 | humidity | 80 | 1440 | > th | dose independent | rect. | 12 | 9 |
| 26 | 18.76 | humidity | 60 | 1440 | > th | dose dependent | sin | 15 | NA |
| 30 | 18.77 | humidity | 80 | 1440 | > th | dose independent | sin | 18 | NA |
| 45 | 18.79 | humidity | 80 | 1440 | > th | dose independent | rect. | 12 | 22 |
| 55 | 18.80 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 16 |
| 58 | 18.80 | humidity | 80 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 59 | 18.80 | humidity | 70 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 101 | 18.85 | humidity | 70 | 1440 | > th | dose independent | rect. | 12 | 7 |
| 157 | 18.89 | radiation | 20 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 158 | 18.89 | humidity | 80 | 1440 | > th | dose independent | rect. | 15 | 6 |
| 166 | 18.89 | humidity | 50 | 1440 | > th | dose dependent | rect. | 19 | 2 |
| 167 | 18.89 | humidity | 70 | 1440 | > th | dose dependent | rect. | 17 | 7 |
| 173 | 18.89 | humidity | 90 | 1440 | < th | dose dependent | rect. | 12 | 17 |
| 179 | 18.90 | humidity | 80 | 1440 | < th | dose independent | rect. | 12 | 9 |
| 261 | 18.94 | humidity | 90 | 1440 | < th | dose dependent | sin | 14 | NA |
| 283 | 18.95 | humidity | 80 | 1440 | > th | dose independent | rect. | 23 | 22 |
| 318 | 18.97 | humidity | 80 | 1440 | < th | dose independent | sin | 19 | NA |
| 319 | 18.97 | humidity | 80 | 1440 | < th | dose independent | rect. | 15 | 6 |
| 321 | 18.97 | humidity | 80 | 1440 | < th | dose independent | rect. | 9 | 12 |
| 327 | 18.97 | humidity | 80 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 328 | 18.97 | humidity | 80 | 1440 | > th | dose independent | rect. | 19 | 23 |
| 338 | 18.98 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 340 | 18.98 | radiation | 20 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 348 | 18.98 | radiation | 40 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 349 | 18.98 | humidity | 90 | 1440 | < th | dose dependent | rect. | 19 | 2 |
| 500 | 19.04 | humidity | 80 | 1440 | < th | dose independent | rect. | 12 | 22 |
| 619 | 19.09 | radiation | 1 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 677 | 19.11 | humidity | 90 | 1440 | < th | dose dependent | rect. | 17 | 10 |
| 686 | 19.12 | humidity | 70 | 1440 | < th | dose independent | rect. | 13 | 5 |
| 769 | 19.15 | humidity | 60 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 823 | 19.18 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 849 | 19.19 | humidity | 70 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 856 | 19.19 | humidity | 80 | 1440 | < th | dose independent | rect. | 19 | 23 |
| 883 | 19.20 | humidity | 80 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 948 | 19.23 | humidity | 80 | 1440 | < th | dose independent | rect. | 19 | 1 |