Os10g0542200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ubiquitin domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0542200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Ubiquitin domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12.3 | 0.165 | 12.1 | 0.153 | 0.277 | -0.453 | 0.092 | 0.208 | 0.181 | 6.47 | 76.72 | 1407 | -- | -- |
| 12.35 | 0.164 | 12.1 | 0.132 | 0.279 | -0.443 | 0.0975 | -- | 0.176 | 6.43 | 76.56 | 1402 | -- | -- |
| 12.32 | 0.163 | 12.1 | 0.155 | 0.277 | -0.452 | -- | 0.216 | 0.181 | 6.47 | 76.68 | 1408 | -- | -- |
| 12.23 | 0.163 | 12.1 | 0.144 | 0.28 | -0.426 | -- | -- | 0.184 | 5.56 | 75.66 | 1236 | -- | -- |
| 12.94 | 0.168 | 12.1 | 0.136 | -- | -0.372 | -- | -0.0191 | 0.163 | -- | 75.87 | 643 | -- | -- |
| 15.35 | 0.184 | 12.1 | 0.0962 | 0.262 | -- | 0.0676 | -- | 0.147 | 6.57 | -- | -- | -- | -- |
| 15.36 | 0.184 | 12.1 | 0.0972 | 0.262 | -- | -- | -- | 0.147 | 6.55 | -- | -- | -- | -- |
| 12.94 | 0.168 | 12.1 | 0.136 | -- | -0.374 | -- | -- | 0.163 | -- | 75.8 | 643 | -- | -- |
| 12.78 | 0.167 | 12.1 | -- | 0.28 | -0.408 | -- | -- | 0.172 | 5.51 | 76 | 1229 | -- | -- |
| 18.93 | 0.203 | 12.1 | 0.104 | -- | -- | -- | -- | 0.152 | -- | -- | -- | -- | -- |
| 15.61 | 0.185 | 12.1 | -- | 0.263 | -- | -- | -- | 0.136 | 6.53 | -- | -- | -- | -- |
| 13.43 | 0.171 | 12.1 | -- | -- | -0.364 | -- | -- | 0.148 | -- | 75.35 | 636 | -- | -- |
| 19.22 | 0.205 | 12.1 | -- | -- | -- | -- | -- | 0.14 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 12.02 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 2 | 12.08 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 7 | 12.15 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 22 | 12.22 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 10 |
| 23 | 12.22 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 11 |
| 33 | 12.25 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 38 | 12.26 | humidity | 70 | 1440 | > th | dose dependent | rect. | 10 | 10 |
| 40 | 12.27 | temperature | 25 | 270 | > th | dose independent | rect. | 9 | 9 |
| 41 | 12.27 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 61 | 12.31 | humidity | 50 | 1440 | > th | dose dependent | rect. | 14 | 6 |
| 62 | 12.31 | humidity | 90 | 1440 | < th | dose dependent | rect. | 14 | 6 |
| 64 | 12.32 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 7 |
| 94 | 12.34 | temperature | 20 | 270 | > th | dose dependent | rect. | 8 | 10 |
| 109 | 12.36 | humidity | 70 | 1440 | > th | dose independent | rect. | 14 | 2 |
| 198 | 12.42 | humidity | 80 | 1440 | < th | dose independent | sin | 21 | NA |
| 284 | 12.46 | humidity | 90 | 1440 | < th | dose dependent | rect. | 12 | 15 |
| 323 | 12.48 | humidity | 50 | 1440 | > th | dose dependent | sin | 18 | NA |
| 324 | 12.48 | humidity | 90 | 1440 | < th | dose dependent | sin | 18 | NA |
| 350 | 12.49 | humidity | 80 | 1440 | > th | dose independent | sin | 21 | NA |
| 353 | 12.49 | humidity | 70 | 1440 | > th | dose independent | rect. | 13 | 5 |
| 391 | 12.50 | humidity | 70 | 1440 | > th | dose dependent | sin | 20 | NA |
| 412 | 12.51 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 22 |
| 566 | 12.56 | humidity | 70 | 1440 | < th | dose independent | rect. | 14 | 2 |
| 647 | 12.59 | radiation | 10 | 1440 | < th | dose independent | sin | 12 | NA |
| 660 | 12.59 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 15 |
| 755 | 12.62 | temperature | 25 | 1440 | > th | dose independent | rect. | 14 | 5 |
| 835 | 12.64 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 844 | 12.64 | radiation | 1 | 1440 | < th | dose dependent | sin | 15 | NA |
| 866 | 12.65 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 873 | 12.65 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 20 |
| 921 | 12.66 | temperature | 20 | 720 | > th | dose dependent | sin | 1 | NA |
| 935 | 12.66 | radiation | 1 | 1440 | < th | dose dependent | rect. | 14 | 11 |
| 944 | 12.67 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 5 |
| 981 | 12.67 | radiation | 30 | 1440 | < th | dose dependent | rect. | 18 | 8 |