Os10g0540800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0540800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 328.91 | 0.852 | 3.98 | -2.08 | 0.0517 | -1.56 | 0.448 | 9.06 | -0.664 | 20.1 | 29.9 | 1271 | -- | -- |
| 341.5 | 0.861 | 3.8 | -0.344 | 0.00432 | -0.722 | 0.054 | -- | -0.75 | 20.5 | 26.81 | 2374 | -- | -- |
| 329.43 | 0.845 | 3.97 | -2.06 | 0.0807 | -1.56 | -- | 8.88 | -0.643 | 20.9 | 29.9 | 1260 | -- | -- |
| 341.01 | 0.86 | 3.79 | -0.249 | 0.00865 | -0.673 | -- | -- | -0.676 | 20.4 | 26.8 | 2344 | -- | -- |
| 329.62 | 0.846 | 3.98 | -2.09 | -- | -1.57 | -- | 9.1 | -0.663 | -- | 29.9 | 1260 | -- | -- |
| 355.11 | 0.883 | 3.76 | -0.0139 | 0.199 | -- | 0.0867 | -- | -0.53 | 0.0267 | -- | -- | -- | -- |
| 355.13 | 0.882 | 3.76 | -0.0176 | 0.199 | -- | -- | -- | -0.53 | 0.233 | -- | -- | -- | -- |
| 341.01 | 0.86 | 3.79 | -0.25 | -- | -0.675 | -- | -- | -0.676 | -- | 26.81 | 2344 | -- | -- |
| 341.98 | 0.861 | 3.78 | -- | 0.128 | -0.56 | -- | -- | -0.622 | 1.72 | 26.8 | 2221 | -- | -- |
| 357.63 | 0.884 | 3.76 | -0.0111 | -- | -- | -- | -- | -0.527 | -- | -- | -- | -- | -- |
| 355.14 | 0.882 | 3.76 | -- | 0.199 | -- | -- | -- | -0.529 | 0.228 | -- | -- | -- | -- |
| 342.52 | 0.862 | 3.78 | -- | -- | -0.613 | -- | -- | -0.638 | -- | 26.85 | 2321 | -- | -- |
| 357.63 | 0.883 | 3.76 | -- | -- | -- | -- | -- | -0.526 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 328.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 3 | 330.92 | humidity | 70 | 10 | > th | dose independent | rect. | 20 | 18 |
| 10 | 331.73 | humidity | 70 | 90 | > th | dose dependent | rect. | 5 | 21 |
| 11 | 331.78 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 15 | 332.16 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 20 |
| 16 | 332.17 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 7 |
| 17 | 332.17 | temperature | 30 | 1440 | < th | dose independent | rect. | 5 | 11 |
| 21 | 332.18 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 17 |
| 31 | 332.29 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 22 |
| 41 | 332.66 | humidity | 70 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 56 | 332.78 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 22 |
| 59 | 332.86 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 60 | 332.88 | temperature | 30 | 1440 | < th | dose independent | sin | 23 | NA |
| 79 | 332.94 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 13 |
| 102 | 332.96 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 110 | 332.97 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 123 | 332.98 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 124 | 332.99 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 168 | 333.05 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 12 |
| 199 | 333.13 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 22 |
| 201 | 333.15 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 9 |
| 204 | 333.16 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 6 |
| 205 | 333.16 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 7 |
| 212 | 333.20 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 18 |
| 269 | 333.41 | humidity | 70 | 720 | > th | dose independent | rect. | 19 | 8 |
| 293 | 333.52 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 13 |
| 352 | 333.86 | temperature | 30 | 1440 | > th | dose independent | sin | 21 | NA |
| 358 | 333.91 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 461 | 333.99 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 6 |
| 490 | 334.01 | humidity | 70 | 720 | > th | dose independent | rect. | 19 | 2 |
| 506 | 334.18 | humidity | 80 | 90 | > th | dose independent | rect. | 5 | 21 |
| 507 | 334.22 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 16 |
| 531 | 334.32 | radiation | 40 | 14400 | > th | dose dependent | rect. | 15 | 18 |
| 613 | 334.76 | radiation | 40 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 655 | 334.95 | humidity | 70 | 90 | > th | dose independent | rect. | 5 | 8 |
| 678 | 335.04 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 683 | 335.07 | humidity | 70 | 10 | > th | dose dependent | rect. | 7 | 17 |
| 687 | 335.11 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 688 | 335.11 | humidity | 80 | 90 | < th | dose independent | rect. | 8 | 11 |
| 700 | 335.24 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 22 |
| 701 | 335.24 | humidity | 70 | 90 | > th | dose dependent | rect. | 6 | 17 |
| 704 | 335.27 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 707 | 335.34 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 708 | 335.35 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 709 | 335.35 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 5 |
| 712 | 335.38 | humidity | 80 | 90 | < th | dose independent | rect. | 8 | 13 |
| 714 | 335.39 | humidity | 70 | 10 | > th | dose independent | rect. | 6 | 8 |
| 720 | 335.44 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 731 | 335.52 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 743 | 335.63 | humidity | 60 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 744 | 335.63 | radiation | 10 | 270 | < th | dose dependent | rect. | 4 | 22 |
| 745 | 335.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 9 |
| 754 | 335.75 | humidity | 80 | 270 | > th | dose independent | rect. | 4 | 19 |
| 757 | 335.78 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 11 |
| 763 | 335.82 | temperature | 30 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 777 | 335.82 | temperature | 30 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 782 | 335.85 | humidity | 90 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 794 | 335.90 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 14 |
| 797 | 335.91 | radiation | 40 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 801 | 335.92 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 13 |
| 828 | 336.01 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 20 |
| 852 | 336.08 | temperature | 25 | 1440 | > th | dose dependent | sin | 0 | NA |
| 859 | 336.09 | humidity | 70 | 90 | > th | dose independent | rect. | 19 | 22 |
| 875 | 336.12 | radiation | 1 | 270 | < th | dose independent | rect. | 3 | 22 |
| 876 | 336.12 | temperature | 30 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 892 | 336.12 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 22 |
| 899 | 336.14 | temperature | 30 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 936 | 336.19 | humidity | 80 | 90 | > th | dose independent | rect. | 6 | 17 |
| 955 | 336.21 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 971 | 336.24 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 976 | 336.25 | temperature | 30 | 14400 | < th | dose independent | rect. | 10 | 3 |