Os10g0540000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0540000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 241.36 | 0.73 | 8.71 | 0.586 | 1.76 | 1.63 | 0.404 | 1.64 | -0.929 | 7.31 | 72 | 6545 | -- | -- |
| 243.48 | 0.727 | 8.72 | 0.491 | 1.71 | 1.89 | 0.238 | -- | -1.05 | 7.44 | 72.8 | 6866 | -- | -- |
| 239.93 | 0.721 | 8.72 | 0.809 | 1.65 | 1.58 | -- | 1.89 | -0.955 | 7.07 | 71.76 | 9019 | -- | -- |
| 243.37 | 0.727 | 8.73 | 0.49 | 1.66 | 1.9 | -- | -- | -1.08 | 7.43 | 72.61 | 6897 | -- | -- |
| 365.74 | 0.891 | 8.77 | 0.831 | -- | 1.58 | -- | 1.94 | -0.951 | -- | 70.02 | 8644 | -- | -- |
| 293.84 | 0.804 | 8.64 | 0.342 | 1.57 | -- | 0.369 | -- | -0.65 | 7.16 | -- | -- | -- | -- |
| 294.2 | 0.803 | 8.64 | 0.349 | 1.57 | -- | -- | -- | -0.651 | 7.16 | -- | -- | -- | -- |
| 370.98 | 0.897 | 8.74 | 0.481 | -- | 1.65 | -- | -- | -0.927 | -- | 72.39 | 12897 | -- | -- |
| 249.82 | 0.736 | 8.74 | -- | 1.66 | 1.81 | -- | -- | -1.09 | 7.4 | 72.72 | 6892 | -- | -- |
| 424.56 | 0.963 | 8.67 | 0.378 | -- | -- | -- | -- | -0.623 | -- | -- | -- | -- | -- |
| 297.41 | 0.807 | 8.65 | -- | 1.57 | -- | -- | -- | -0.69 | 7.15 | -- | -- | -- | -- |
| 377.05 | 0.904 | 8.75 | -- | -- | 1.6 | -- | -- | -0.969 | -- | 72.24 | 12909 | -- | -- |
| 428.34 | 0.966 | 8.68 | -- | -- | -- | -- | -- | -0.665 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 235.12 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 13 | 2 |
| 5 | 235.62 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 12 | 5 |
| 10 | 235.84 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 21 | 236.17 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 54 | 236.75 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 63 | 236.95 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 69 | 237.06 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 115 | 237.64 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 132 | 237.80 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 133 | 237.81 | humidity | 90.0 | 14400 | < th | dose dependent | sin | 21 | NA |
| 141 | 237.92 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 143 | 237.92 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 152 | 238.05 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 154 | 238.05 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 157 | 238.06 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 158 | 238.06 | humidity | 50.0 | 14400 | > th | dose dependent | sin | 22 | NA |
| 182 | 238.22 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 260 | 238.83 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 435 | 239.86 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 438 | 239.88 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 462 | 239.97 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 10 |
| 466 | 239.98 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 468 | 239.99 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 501 | 240.13 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 522 | 240.19 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 524 | 240.20 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 525 | 240.20 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 535 | 240.25 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 536 | 240.25 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 551 | 240.31 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 561 | 240.35 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 4 |
| 661 | 240.65 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 2 | 18 |
| 665 | 240.68 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 15 |
| 668 | 240.68 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 15 |
| 670 | 240.69 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 15 |
| 688 | 240.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 22 | 22 |
| 705 | 240.82 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 3 |
| 739 | 240.94 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 18 |
| 742 | 240.95 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 18 |
| 744 | 240.95 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 18 |
| 751 | 240.97 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 772 | 241.00 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 10 |
| 830 | 241.17 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 857 | 241.24 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 15 | 19 |
| 858 | 241.24 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 2 | NA |
| 870 | 241.28 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 881 | 241.33 | humidity | 80.0 | 14400 | < th | dose dependent | no | NA | NA |
| 956 | 241.53 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 12 |
| 960 | 241.53 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 17 |
| 972 | 241.55 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |