Os10g0539900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : General substrate transporter family protein.
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Os10g0539900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : General substrate transporter family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.31 | 0.337 | 12.9 | 0.588 | 0.711 | 0.557 | 0.499 | 0.631 | 0.343 | 22.2 | 20.9 | 1582 | -- | -- |
| 52.2 | 0.337 | 12.9 | 0.476 | 0.708 | 0.465 | 0.496 | -- | 0.349 | 22.2 | 21 | 1629 | -- | -- |
| 52.26 | 0.337 | 12.9 | 0.569 | 0.713 | 0.559 | -- | 0.628 | 0.342 | 22 | 20.9 | 1581 | -- | -- |
| 53.02 | 0.339 | 12.9 | 0.43 | 0.714 | 0.488 | -- | -- | 0.309 | 22.1 | 21.03 | 1579 | -- | -- |
| 78.93 | 0.414 | 12.9 | 0.663 | -- | 0.515 | -- | 0.597 | 0.322 | -- | 21.8 | 872 | -- | -- |
| 58.08 | 0.357 | 12.9 | 0.661 | 0.714 | -- | 0.514 | -- | 0.438 | 22.2 | -- | -- | -- | -- |
| 59.1 | 0.36 | 12.9 | 0.642 | 0.714 | -- | -- | -- | 0.437 | 22 | -- | -- | -- | -- |
| 69.86 | 0.389 | 12.9 | 0.446 | -- | 0.69 | -- | -- | 0.197 | -- | 25.21 | 820 | -- | -- |
| 56.33 | 0.35 | 12.9 | -- | 0.718 | 0.638 | -- | -- | 0.226 | 22.1 | 19.6 | 7358 | -- | -- |
| 89.83 | 0.443 | 12.9 | 0.651 | -- | -- | -- | -- | 0.438 | -- | -- | -- | -- | -- |
| 69.97 | 0.391 | 12.9 | -- | 0.717 | -- | -- | -- | 0.366 | 22.1 | -- | -- | -- | -- |
| 74.71 | 0.403 | 12.9 | -- | -- | 0.765 | -- | -- | 0.122 | -- | 25.2 | 835 | -- | -- |
| 101.03 | 0.469 | 12.9 | -- | -- | -- | -- | -- | 0.366 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.65 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 8 |
| 7 | 45.94 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 30 | 47.85 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 36 | 48.04 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 50 | 48.64 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 14 | 16 |
| 55 | 48.69 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 14 |
| 56 | 48.71 | radiation | 40.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 61 | 48.78 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 8 |
| 67 | 48.83 | wind | 5.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 80 | 48.98 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 84 | 48.99 | temperature | 20.0 | 10 | > th | dose independent | rect. | 8 | 21 |
| 108 | 49.34 | radiation | 40.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 116 | 49.40 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 131 | 49.56 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 7 | 7 |
| 138 | 49.60 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 142 | 49.64 | temperature | 20.0 | 10 | > th | dose independent | rect. | 8 | 19 |
| 154 | 49.71 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 158 | 49.74 | temperature | 20.0 | 10 | > th | dose independent | rect. | 8 | 17 |
| 159 | 49.75 | temperature | 25.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 160 | 49.75 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 18 |
| 181 | 49.85 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 242 | 50.11 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 248 | 50.14 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 250 | 50.15 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 8 | 17 |
| 254 | 50.16 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 17 |
| 260 | 50.17 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 19 |
| 262 | 50.18 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 1 |
| 266 | 50.19 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 268 | 50.19 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 272 | 50.20 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 6 |
| 274 | 50.20 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 281 | 50.22 | humidity | 90.0 | 10 | < th | dose independent | rect. | 1 | 7 |
| 282 | 50.22 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 18 |
| 286 | 50.22 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 290 | 50.24 | humidity | 70.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 310 | 50.32 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 314 | 50.34 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 325 | 50.36 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 332 | 50.37 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 7 | 18 |
| 338 | 50.39 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 343 | 50.41 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 365 | 50.47 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 366 | 50.47 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 372 | 50.48 | wind | 9.0 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 381 | 50.50 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 383 | 50.50 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 384 | 50.50 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 386 | 50.50 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 387 | 50.50 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 391 | 50.50 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 394 | 50.51 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 398 | 50.51 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 403 | 50.52 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 429 | 50.57 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 456 | 50.62 | humidity | 60.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 467 | 50.64 | radiation | 1.0 | 90 | > th | dose independent | rect. | 18 | 13 |
| 471 | 50.65 | temperature | 20.0 | 720 | > th | dose independent | sin | 21 | NA |
| 495 | 50.69 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 8 | 19 |
| 514 | 50.73 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 521 | 50.74 | temperature | 20.0 | 720 | > th | dose independent | rect. | 13 | 12 |
| 522 | 50.74 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 8 | 17 |
| 542 | 50.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 1 |
| 548 | 50.77 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 549 | 50.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 554 | 50.78 | temperature | 10.0 | 270 | > th | dose dependent | sin | 10 | NA |
| 558 | 50.79 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 1 | 7 |
| 562 | 50.79 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 1 | 7 |
| 573 | 50.82 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 574 | 50.82 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 590 | 50.83 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 621 | 50.86 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 17 |
| 647 | 50.89 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 648 | 50.90 | temperature | 25.0 | 270 | < th | dose independent | sin | 11 | NA |
| 652 | 50.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 22 |
| 655 | 50.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 656 | 50.91 | temperature | 20.0 | 720 | > th | dose independent | sin | 17 | NA |
| 674 | 50.91 | radiation | 1.0 | 90 | < th | dose dependent | sin | 12 | NA |
| 705 | 50.95 | radiation | 1.0 | 90 | < th | dose independent | sin | 12 | NA |
| 745 | 51.00 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 18 | 8 |
| 759 | 51.01 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 8 | 19 |
| 787 | 51.03 | temperature | 25.0 | 270 | < th | dose independent | rect. | 22 | 8 |
| 788 | 51.03 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 9 |
| 792 | 51.03 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 793 | 51.04 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 806 | 51.05 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 837 | 51.08 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 15 |
| 840 | 51.08 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 843 | 51.08 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 848 | 51.09 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 5 |
| 865 | 51.09 | temperature | 30.0 | 270 | < th | dose dependent | sin | 11 | NA |
| 866 | 51.09 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 5 |
| 876 | 51.10 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 879 | 51.11 | temperature | 20.0 | 270 | > th | dose independent | sin | 14 | NA |
| 914 | 51.14 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 928 | 51.16 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 5 |
| 929 | 51.16 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 932 | 51.16 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 934 | 51.16 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 935 | 51.16 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 5 |
| 947 | 51.16 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 19 |
| 954 | 51.17 | wind | 9.0 | 10 | < th | dose independent | rect. | 1 | 7 |
| 956 | 51.17 | temperature | 10.0 | 10 | > th | dose independent | rect. | 1 | 7 |
| 958 | 51.17 | temperature | 30.0 | 10 | < th | dose independent | rect. | 1 | 7 |
| 959 | 51.17 | humidity | 50.0 | 10 | > th | dose independent | rect. | 1 | 7 |
| 962 | 51.17 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 1 | 7 |
| 963 | 51.17 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 1 | 7 |
| 966 | 51.17 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 19 |
| 976 | 51.17 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 19 |
| 993 | 51.19 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 995 | 51.19 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 996 | 51.19 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 999 | 51.19 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 1000 | 51.19 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 1 |