Os10g0536400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0536400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 210.77 | 0.682 | 13 | 0.706 | 0.528 | 1.32 | -1.11 | 1.91 | 0.877 | 14.7 | 1.19 | 4342 | -- | -- |
| 216.88 | 0.686 | 13.1 | 0.317 | 0.421 | 1.34 | -1.03 | -- | 0.83 | 14.6 | 1.19 | 4361 | -- | -- |
| 214.73 | 0.682 | 13 | 0.702 | 0.539 | 1.3 | -- | 1.82 | 0.876 | 14.4 | 1.19 | 4318 | -- | -- |
| 219.95 | 0.691 | 13.1 | 0.257 | 0.432 | 1.16 | -- | -- | 0.825 | 14.6 | 1.19 | 4354 | -- | -- |
| 224.49 | 0.698 | 13.1 | 0.597 | -- | 1.57 | -- | 1.09 | 0.756 | -- | 1.233 | 7666 | -- | -- |
| 244.5 | 0.733 | 13 | 0.559 | 0.525 | -- | -1.1 | -- | 1.07 | 14.6 | -- | -- | -- | -- |
| 248.74 | 0.739 | 13 | 0.531 | 0.52 | -- | -- | -- | 1.06 | 14.4 | -- | -- | -- | -- |
| 222.98 | 0.695 | 13.1 | 0.209 | -- | 1.64 | -- | -- | 0.731 | -- | 1.2 | 7594 | -- | -- |
| 221.62 | 0.693 | 13.1 | -- | 0.449 | 1.24 | -- | -- | 0.819 | 15 | 1.19 | 4355 | -- | -- |
| 264.75 | 0.76 | 13 | 0.509 | -- | -- | -- | -- | 1.05 | -- | -- | -- | -- | -- |
| 256.17 | 0.749 | 13 | -- | 0.51 | -- | -- | -- | 1 | 14.4 | -- | -- | -- | -- |
| 224.21 | 0.697 | 13.1 | -- | -- | 1.71 | -- | -- | 0.715 | -- | 1.199 | 7594 | -- | -- |
| 271.59 | 0.769 | 13 | -- | -- | -- | -- | -- | 0.99 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 206.79 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 14 |
| 4 | 207.14 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 23 |
| 7 | 207.67 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 10 | 207.80 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 11 | 207.85 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 14 |
| 12 | 207.88 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 16 |
| 20 | 208.59 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 4 | 13 |
| 32 | 208.69 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 4 | 13 |
| 35 | 208.71 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 22 | 19 |
| 42 | 208.76 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 5 | 5 |
| 43 | 208.79 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 5 | 5 |
| 63 | 208.97 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 22 | 12 |
| 79 | 209.02 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 14 |
| 95 | 209.17 | radiation | 1.0 | 4320 | > th | dose independent | sin | 9 | NA |
| 125 | 209.37 | radiation | 1.0 | 4320 | > th | dose independent | sin | 5 | NA |
| 143 | 209.42 | radiation | 1.0 | 4320 | < th | dose independent | sin | 8 | NA |
| 166 | 209.53 | wind | 9.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 174 | 209.58 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 4 | 4 |
| 184 | 209.67 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 22 | 10 |
| 273 | 210.07 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 23 |
| 276 | 210.21 | radiation | 1.0 | 4320 | < th | dose dependent | sin | 7 | NA |
| 301 | 210.41 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 315 | 210.50 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 367 | 210.97 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 372 | 211.23 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 15 | 18 |
| 380 | 211.38 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 394 | 211.52 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 5 |
| 399 | 211.53 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 444 | 211.66 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 463 | 211.74 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 481 | 211.90 | radiation | 1.0 | 4320 | > th | dose independent | no | NA | NA |
| 547 | 212.01 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 548 | 212.02 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 551 | 212.06 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 15 | 19 |
| 556 | 212.09 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 11 |
| 557 | 212.10 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 7 |
| 565 | 212.16 | radiation | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 2 |
| 603 | 212.35 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 631 | 212.59 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 18 | 5 |
| 650 | 212.65 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 4 | 19 |
| 654 | 212.65 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 2 |
| 655 | 212.66 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 4 | 16 |
| 673 | 212.67 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 22 | 22 |
| 679 | 212.68 | radiation | 1.0 | 4320 | < th | dose independent | no | NA | NA |
| 715 | 212.71 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 716 | 212.71 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 5 |
| 769 | 212.98 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 778 | 213.06 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 810 | 213.16 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 3 |
| 811 | 213.16 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 16 | 16 |
| 817 | 213.17 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 16 | 18 |
| 847 | 213.26 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 883 | 213.36 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 936 | 213.44 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 941 | 213.45 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 943 | 213.45 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 965 | 213.50 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 15 |
| 987 | 213.52 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 4 |