Os10g0535600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0535600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 105.26 | 0.482 | 9.19 | 0.283 | 0.318 | -0.839 | -0.73 | -0.812 | 0.137 | 6.93 | 57.64 | 976 | -- | -- |
| 105.87 | 0.479 | 9.19 | 0.324 | 0.323 | -0.894 | -0.593 | -- | 0.127 | 6.63 | 56.98 | 967 | -- | -- |
| 105.97 | 0.479 | 9.19 | 0.28 | 0.339 | -0.867 | -- | -0.661 | 0.136 | 5.78 | 57.54 | 985 | -- | -- |
| 106.33 | 0.48 | 9.19 | 0.311 | 0.348 | -0.925 | -- | -- | 0.13 | 5.77 | 56.98 | 981 | -- | -- |
| 110.7 | 0.49 | 9.19 | 0.295 | -- | -0.899 | -- | -0.639 | 0.159 | -- | 58 | 861 | -- | -- |
| 128.89 | 0.532 | 9.15 | 0.165 | 0.376 | -- | -0.594 | -- | 0.28 | 7.69 | -- | -- | -- | -- |
| 129.83 | 0.534 | 9.15 | 0.148 | 0.379 | -- | -- | -- | 0.28 | 7.36 | -- | -- | -- | -- |
| 111.25 | 0.491 | 9.18 | 0.288 | -- | -0.885 | -- | -- | 0.154 | -- | 65 | 894 | -- | -- |
| 108.87 | 0.486 | 9.18 | -- | 0.339 | -0.865 | -- | -- | 0.122 | 5.88 | 57 | 976 | -- | -- |
| 137.49 | 0.548 | 9.16 | 0.155 | -- | -- | -- | -- | 0.286 | -- | -- | -- | -- | -- |
| 130.41 | 0.534 | 9.15 | -- | 0.381 | -- | -- | -- | 0.263 | 7.34 | -- | -- | -- | -- |
| 113.01 | 0.495 | 9.2 | -- | -- | -0.916 | -- | -- | 0.107 | -- | 64.79 | 850 | -- | -- |
| 138.12 | 0.549 | 9.16 | -- | -- | -- | -- | -- | 0.269 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.03 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 14 |
| 3 | 99.72 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 6 |
| 4 | 101.03 | humidity | 70.0 | 720 | < th | dose independent | rect. | 17 | 1 |
| 15 | 103.30 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 2 |
| 16 | 103.46 | humidity | 70.0 | 720 | < th | dose independent | rect. | 17 | 16 |
| 19 | 103.55 | humidity | 70.0 | 720 | > th | dose independent | sin | 12 | NA |
| 54 | 104.79 | humidity | 70.0 | 720 | < th | dose independent | sin | 12 | NA |
| 62 | 105.15 | humidity | 70.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 65 | 105.29 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 15 | 19 |
| 76 | 105.54 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 10 |
| 87 | 105.68 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 16 | 3 |
| 91 | 105.77 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 15 | 6 |
| 187 | 107.15 | temperature | 30.0 | 720 | < th | dose independent | sin | 12 | NA |
| 221 | 107.46 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 14 | 3 |
| 223 | 107.47 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 17 |
| 258 | 107.66 | humidity | 60.0 | 720 | > th | dose independent | rect. | 4 | 19 |
| 325 | 107.94 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 326 | 107.94 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 15 |
| 348 | 108.00 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 17 | 18 |
| 394 | 108.23 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 11 | 12 |
| 408 | 108.35 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 6 |
| 422 | 108.38 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 14 | 20 |
| 427 | 108.42 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 9 | 12 |
| 443 | 108.54 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 1 |
| 452 | 108.57 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 13 |
| 464 | 108.62 | humidity | 60.0 | 1440 | < th | dose independent | rect. | 11 | 6 |
| 465 | 108.62 | humidity | 60.0 | 720 | > th | dose independent | rect. | 11 | 23 |
| 468 | 108.63 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 472 | 108.64 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 475 | 108.66 | humidity | 60.0 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 476 | 108.66 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 491 | 108.67 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 502 | 108.70 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 526 | 108.74 | humidity | 60.0 | 720 | > th | dose independent | rect. | 9 | 23 |
| 556 | 108.79 | humidity | 60.0 | 1440 | > th | dose independent | sin | 18 | NA |
| 581 | 108.82 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 601 | 108.85 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 8 | 11 |
| 620 | 108.90 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 709 | 108.98 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 757 | 109.02 | wind | 5.0 | 14400 | > th | dose independent | rect. | 19 | 16 |
| 770 | 109.03 | humidity | 60.0 | 1440 | < th | dose independent | no | NA | NA |
| 857 | 109.04 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 6 | 3 |
| 863 | 109.05 | humidity | 60.0 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 868 | 109.06 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 15 | 8 |
| 890 | 109.07 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 5 | 18 |
| 939 | 109.15 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 16 | 3 |