FiT-DB / Search/ Help/ Sample detail

Os10g0533100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0378) R2 : 0.938
β1 : -- (--) R2dD : -- R2D : --
β2 : 8.74 (0.106) R2dC : 1.07 R2C : 0.841
β3 : 2.66 (0.112) R2dE : 0.0907 R2E : -0.146
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.402 (0.0797) R2dN8 : 0.00465 R2N8 : 0.00499
σ : 0.71
deviance : 232.63
__
_____
C
peak time of C : 17.3
E
wheather : precipitation
threshold : 2.911
memory length : 273
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 21
open length of G : 4.25

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
214.8 0.689 10.1 0.378 8.74 2.7 -1.39 1.33 -0.37 17.3 0.5 275 21 4.17
219.24 0.69 10.1 0.4 8.76 2.71 -1.95 -- -0.36 17.3 0.5481 274 21 4.18
218.73 0.689 10.2 0.371 8.75 2.69 -- 1.82 -0.378 17.3 0.4863 274 21 4.22
228.59 0.704 10.2 0.39 8.74 2.69 -- -- -0.367 17.3 1.187 280 21 4.17
3581.12 2.8 10 0.113 -- 1.26 -- 0.324 -0.602 -- 0.5156 2925 21.1 4.2
345.57 0.871 10.2 0.303 8.04 -- -1.58 -- -0.469 18.1 -- -- -- --
351.71 0.878 10.2 0.318 8.03 -- -- -- -0.475 18.1 -- -- -- --
1829.59 1.99 10.1 0.0913 -- 4.71 -- -- -0.834 -- 2.788 58 12.3 7.63
232.63 0.71 10.2 -- 8.74 2.66 -- -- -0.402 17.3 2.911 273 21 4.25
3691.54 2.84 10.1 0.0885 -- -- -- -- -0.655 -- -- -- -- --
354.38 0.881 10.2 -- 8.02 -- -- -- -0.51 18.1 -- -- -- --
315.36 0.827 10 -- -- 7.68 -- -- -0.876 -- 3.116 461 6.97 14.9
3691.74 2.84 10.1 -- -- -- -- -- -0.665 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 217.11 precipitation 0.1 270 < th dose independent rect. 21 4
2 217.11 precipitation 0.1 270 < th dose dependent rect. 21 4
3 217.19 temperature 15.0 270 > th dose independent rect. 1 20
4 217.30 wind 7.0 270 < th dose independent rect. 21 4
6 217.92 radiation 1.0 270 < th dose dependent rect. 21 4
7 217.93 temperature 10.0 270 > th dose independent rect. 21 4
8 217.93 temperature 30.0 270 < th dose independent rect. 21 4
9 217.93 humidity 50.0 270 > th dose independent rect. 21 4
12 217.93 atmosphere 995.0 270 > th dose independent rect. 21 4
13 217.93 radiation 1.0 270 < th dose independent rect. 21 4
25 219.27 humidity 50.0 270 > th dose dependent rect. 21 4
26 219.83 atmosphere 1015.0 270 < th dose independent rect. 1 20
27 220.23 wind 9.0 270 < th dose independent rect. 1 20
28 220.59 wind 9.0 270 < th dose dependent rect. 21 4
29 221.09 precipitation 0.1 270 < th dose independent rect. 20 6
30 221.09 precipitation 0.1 270 < th dose dependent rect. 20 6
31 221.56 wind 7.0 270 < th dose independent rect. 20 6
34 221.95 radiation 1.0 270 < th dose dependent rect. 20 6
35 221.96 temperature 10.0 270 > th dose independent rect. 20 6
36 221.96 temperature 30.0 270 < th dose independent rect. 20 6
37 221.96 humidity 50.0 270 > th dose independent rect. 20 6
40 221.96 atmosphere 995.0 270 > th dose independent rect. 20 6
41 221.96 radiation 1.0 270 < th dose independent rect. 20 6
47 221.96 atmosphere 1015.0 270 < th dose independent rect. 2 18
97 223.46 precipitation 0.1 270 < th dose independent rect. 1 20
98 223.46 precipitation 0.1 270 < th dose dependent rect. 1 20
99 223.74 wind 9.0 270 < th dose independent rect. 2 18
112 223.79 temperature 10.0 90 > th dose independent rect. 4 18
113 223.79 atmosphere 1015.0 90 < th dose independent rect. 4 18
121 224.25 temperature 15.0 270 > th dose independent rect. 24 23
122 224.31 radiation 1.0 10 < th dose dependent rect. 23 15
124 224.39 wind 5.0 270 < th dose independent rect. 23 1
128 224.68 temperature 10.0 270 > th dose independent rect. 23 1
129 224.68 temperature 30.0 270 < th dose independent rect. 23 1
130 224.68 humidity 50.0 270 > th dose independent rect. 23 1
133 224.68 atmosphere 995.0 270 > th dose independent rect. 23 1
134 224.68 radiation 1.0 270 < th dose independent rect. 23 1
140 224.68 radiation 1.0 270 < th dose dependent rect. 23 1
145 224.72 precipitation 0.1 270 < th dose independent rect. 23 1
146 224.72 precipitation 0.1 270 < th dose dependent rect. 23 1
168 225.12 humidity 50.0 270 > th dose dependent rect. 23 1
172 225.37 radiation 1.0 10 < th dose dependent rect. 23 13
177 225.82 precipitation 0.1 270 < th dose independent rect. 2 18
178 225.82 precipitation 0.1 270 < th dose dependent rect. 2 18
181 226.44 wind 9.0 90 < th dose independent rect. 4 18
182 226.47 radiation 1.0 10 < th dose dependent rect. 23 9
187 226.57 atmosphere 995.0 270 > th dose independent rect. 1 20
188 226.58 radiation 1.0 10 < th dose dependent rect. 23 7
217 227.36 humidity 50.0 30 > th dose dependent rect. 23 5
223 227.83 atmosphere 995.0 270 > th dose independent rect. 2 18
225 228.24 temperature 10.0 270 > th dose dependent rect. 2 5
226 228.25 wind 7.0 270 < th dose dependent rect. 2 5
227 228.31 temperature 10.0 270 > th dose dependent rect. 21 4
228 228.48 radiation 1.0 10 < th dose independent rect. 23 15
232 228.55 temperature 10.0 270 > th dose dependent rect. 3 3
234 228.78 wind 9.0 270 < th dose dependent rect. 23 1
239 228.84 humidity 50.0 270 > th dose dependent rect. 20 6
240 228.85 wind 5.0 270 < th dose dependent rect. 3 3
246 229.20 temperature 10.0 270 > th dose dependent rect. 23 1
247 229.29 wind 9.0 270 < th dose dependent rect. 20 6
276 229.54 radiation 1.0 10 < th dose independent rect. 23 13
278 229.57 precipitation 0.1 10 < th dose independent rect. 4 19
279 229.57 precipitation 0.1 10 < th dose dependent rect. 4 19
283 230.09 radiation 1.0 10 < th dose independent rect. 23 7
290 230.49 temperature 10.0 30 > th dose dependent rect. 23 5
298 230.79 wind 1.0 270 > th dose independent rect. 21 4
299 230.88 wind 3.0 270 < th dose independent rect. 2 5
310 231.38 atmosphere 995.0 30 > th dose independent rect. 4 19
313 231.46 wind 9.0 90 < th dose dependent rect. 22 6
317 231.53 atmosphere 1015.0 270 < th dose independent rect. 21 4
417 233.65 wind 1.0 90 > th dose independent rect. 23 16
424 233.98 wind 3.0 270 < th dose independent rect. 3 3
427 234.13 atmosphere 1015.0 270 < th dose independent rect. 23 1
510 234.70 radiation 20.0 270 < th dose independent rect. 16 14
519 234.96 wind 9.0 270 < th dose dependent rect. 1 8
528 235.14 atmosphere 1015.0 30 < th dose independent rect. 23 5
556 235.40 wind 9.0 270 < th dose independent rect. 24 23
584 235.52 humidity 50.0 270 > th dose dependent rect. 1 8
585 235.53 temperature 15.0 270 > th dose independent rect. 15 15
590 235.66 humidity 50.0 270 > th dose dependent rect. 2 5
596 235.87 precipitation 0.1 270 < th dose independent rect. 7 19
597 235.87 precipitation 0.1 270 < th dose dependent rect. 7 19
612 235.89 wind 3.0 90 < th dose dependent rect. 4 5
621 236.07 precipitation 0.1 270 < th dose independent rect. 2 5
622 236.07 precipitation 0.1 270 < th dose dependent rect. 2 5
624 236.11 radiation 40.0 270 < th dose dependent rect. 15 15
666 236.68 wind 9.0 270 < th dose independent rect. 6 10
671 236.77 precipitation 0.1 270 < th dose independent rect. 6 10
672 236.77 precipitation 0.1 270 < th dose dependent rect. 6 10
674 236.85 temperature 10.0 270 > th dose independent rect. 6 10
675 236.85 atmosphere 1015.0 270 < th dose independent rect. 6 10
684 237.11 wind 9.0 270 < th dose independent rect. 16 14
735 238.09 wind 9.0 270 < th dose independent rect. 7 19
738 238.20 atmosphere 1010.0 270 < th dose independent rect. 2 5
742 238.37 wind 9.0 90 < th dose dependent rect. 4 18
743 238.38 wind 1.0 30 > th dose independent rect. 23 6
745 238.46 precipitation 0.1 270 < th dose independent rect. 9 16
746 238.46 precipitation 0.1 270 < th dose dependent rect. 9 16
749 238.54 radiation 30.0 270 < th dose dependent rect. 2 7
751 238.55 temperature 10.0 270 > th dose independent rect. 2 5
753 238.55 temperature 30.0 270 < th dose independent rect. 2 5
754 238.55 humidity 50.0 270 > th dose independent rect. 2 5
756 238.55 atmosphere 995.0 270 > th dose independent rect. 2 5
758 238.55 radiation 40.0 270 < th dose independent rect. 2 5
759 238.55 temperature 10.0 270 > th dose independent rect. 7 19
760 238.57 radiation 20.0 270 < th dose independent rect. 2 5
765 238.69 precipitation 0.1 270 < th dose independent rect. 3 3
766 238.69 precipitation 0.1 270 < th dose dependent rect. 3 3
771 238.83 humidity 50.0 270 > th dose dependent rect. 3 3
772 238.84 wind 5.0 90 < th dose dependent rect. 3 8
788 239.02 radiation 40.0 270 < th dose dependent rect. 2 5
802 239.24 precipitation 0.1 270 < th dose independent rect. 6 21
803 239.24 precipitation 0.1 270 < th dose dependent rect. 6 21
806 239.31 temperature 15.0 10 > th dose dependent rect. 4 4
811 239.48 wind 1.0 270 > th dose independent rect. 6 9
826 239.69 temperature 20.0 90 > th dose independent rect. 4 3
831 239.85 precipitation 0.1 270 < th dose independent rect. 1 8
832 239.85 precipitation 0.1 270 < th dose dependent rect. 1 8
846 240.19 temperature 15.0 270 > th dose independent rect. 13 8
851 240.32 wind 1.0 270 > th dose independent rect. 23 1
893 240.64 radiation 20.0 270 < th dose independent rect. 1 8
901 240.78 temperature 30.0 270 < th dose independent rect. 1 8
906 240.91 radiation 40.0 90 < th dose independent rect. 4 18
923 241.23 wind 9.0 270 < th dose independent rect. 6 21
926 241.36 humidity 50.0 270 > th dose independent rect. 2 18
932 241.45 radiation 1.0 270 < th dose independent rect. 2 18
938 241.55 atmosphere 995.0 270 > th dose independent rect. 6 9
946 241.66 radiation 1.0 270 < th dose dependent rect. 3 16
949 241.70 temperature 10.0 270 > th dose independent rect. 3 3
951 241.70 temperature 30.0 270 < th dose independent rect. 3 3
952 241.70 humidity 50.0 270 > th dose independent rect. 3 3
955 241.70 atmosphere 995.0 270 > th dose independent rect. 3 3
956 241.70 atmosphere 1015.0 270 < th dose independent rect. 3 3
957 241.70 radiation 20.0 270 < th dose independent rect. 3 3
960 241.70 temperature 10.0 270 > th dose independent rect. 6 21
962 241.73 wind 9.0 270 < th dose independent rect. 9 16
965 241.77 wind 7.0 270 < th dose independent rect. 1 8
974 241.92 atmosphere 995.0 270 > th dose independent rect. 16 14
980 242.09 temperature 10.0 270 > th dose independent rect. 1 8
982 242.09 humidity 50.0 270 > th dose independent rect. 1 8
983 242.09 atmosphere 995.0 270 > th dose independent rect. 1 8
984 242.09 atmosphere 1015.0 270 < th dose independent rect. 1 8
985 242.09 temperature 10.0 270 > th dose independent rect. 9 16