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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0531900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to BZIP-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.52 (0.0587) R2 : 0.596
β1 : -5.03 (0.226) R2dD : 0.504 R2D : 0.305
β2 : 0.447 (0.14) R2dC : 0.00916 R2C : -0.025
β3 : 1.18 (0.219) R2dE : 0.0261 R2E : -0.0167
β4 : -3.52 (0.53) R2dD*C : 0.0394 R2D*C : 0.0283
β5 : -6.91 (0.933) R2dD*E : 0.0541 R2D*E : -0.0927
γ1 : -1.56 (0.126) R2dN8 : 0.185 R2N8 : 0.033
σ : 1.11
deviance : 554.37
__
_____
C
peak time of C : 12.2
E
wheather : radiation
threshold : 49.27
memory length : 1396
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
554.37 1.11 4.52 -5.03 0.447 1.18 -3.52 -6.91 -1.56 12.2 49.27 1396 -- --
597.35 1.14 4.53 -4.01 0.348 1.76 -3.04 -- -1.38 13 58.36 1444 -- --
601.6 1.14 4.47 -5.04 0.539 1.37 -- -6.5 -1.48 9.79 50.98 1401 -- --
616.18 1.16 4.48 -3.86 0.232 3.26 -- -- -1.27 13.3 64.27 1508 -- --
614.71 1.15 4.44 -4.46 -- 1.11 -- -6.2 -1.35 -- 54.23 1458 -- --
648.63 1.19 4.51 -4.54 0.441 -- -3.55 -- -1.46 12.1 -- -- -- --
697.61 1.24 4.51 -4.69 0.561 -- -- -- -1.48 9.7 -- -- -- --
614.16 1.15 4.44 -3.85 -- 3.9 -- -- -1.16 -- 64.25 1860 -- --
971.1 1.45 4.39 -- 0.385 3.59 -- -- -0.846 14 64.27 1469 -- --
716.27 1.25 4.53 -4.7 -- -- -- -- -1.48 -- -- -- -- --
1278.25 1.67 4.39 -- 0.579 -- -- -- -0.961 10.3 -- -- -- --
915.98 1.41 4.25 -- -- 4.54 -- -- -0.675 -- 68.66 2836 -- --
1298.65 1.68 4.41 -- -- -- -- -- -0.962 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 537.60 radiation 10 1440 < th dose independent rect. 15 2
5 554.13 radiation 10 1440 < th dose independent rect. 15 12
8 554.19 radiation 10 1440 < th dose independent rect. 15 14
10 554.22 radiation 10 1440 < th dose independent rect. 15 10
12 554.25 radiation 10 1440 < th dose independent rect. 15 8
17 558.89 radiation 40 1440 > th dose dependent rect. 13 23
18 559.10 radiation 20 1440 < th dose dependent rect. 15 2
19 559.19 radiation 1 1440 > th dose dependent rect. 15 15
21 559.58 radiation 1 1440 > th dose dependent rect. 15 2
23 560.28 radiation 20 1440 < th dose dependent rect. 15 15
27 561.41 wind 1 14400 < th dose dependent rect. 1 2
30 562.17 radiation 40 43200 > th dose independent rect. 7 1
46 562.17 radiation 40 43200 > th dose dependent rect. 7 1
64 563.13 radiation 1 1440 > th dose dependent rect. 15 4
93 564.91 radiation 30 1440 < th dose dependent rect. 15 12
95 564.95 radiation 30 1440 < th dose dependent rect. 15 4
98 565.04 radiation 30 1440 < th dose dependent rect. 15 10
103 565.13 radiation 30 1440 < th dose dependent rect. 15 8
120 565.71 radiation 40 1440 > th dose dependent sin 12 NA
123 565.73 wind 1 14400 < th dose dependent rect. 22 8
135 566.51 radiation 1 1440 > th dose dependent rect. 11 1
139 567.04 wind 1 14400 < th dose dependent rect. 22 6
150 567.29 radiation 40 1440 > th dose dependent no NA NA
151 567.29 radiation 40 1440 > th dose dependent rect. 8 8
287 567.41 radiation 40 1440 > th dose dependent sin 3 NA
337 568.47 radiation 40 1440 > th dose dependent rect. 10 2
339 568.71 radiation 40 1440 < th dose independent rect. 11 1
343 568.78 temperature 20 720 > th dose independent rect. 5 1
385 569.51 wind 1 14400 < th dose dependent rect. 20 11
397 569.65 radiation 40 1440 > th dose dependent rect. 8 4
415 569.73 atmosphere 995 43200 > th dose independent sin 9 NA
442 570.04 temperature 20 720 > th dose dependent rect. 5 2
444 570.10 atmosphere 995 43200 < th dose dependent sin 15 NA
447 570.17 temperature 25 270 < th dose independent rect. 7 4
448 570.19 atmosphere 995 43200 < th dose dependent sin 12 NA
450 570.35 atmosphere 995 43200 < th dose independent sin 10 NA
455 570.53 atmosphere 995 43200 < th dose independent rect. 18 15
459 570.69 atmosphere 995 43200 > th dose independent rect. 18 16
461 570.76 atmosphere 995 43200 < th dose dependent rect. 13 17
466 571.07 temperature 20 720 > th dose independent rect. 3 4
489 572.57 radiation 10 1440 > th dose independent rect. 15 2
494 572.72 radiation 20 1440 < th dose independent sin 14 NA
514 573.39 temperature 20 720 < th dose independent rect. 1 6
518 573.41 temperature 20 720 > th dose dependent rect. 4 4
549 574.07 radiation 30 1440 < th dose dependent sin 14 NA
550 574.08 radiation 1 1440 > th dose dependent sin 14 NA
558 574.19 atmosphere 995 43200 > th dose independent rect. 21 12
559 574.19 radiation 10 1440 < th dose dependent sin 14 NA
560 574.20 atmosphere 1015 43200 > th dose independent rect. 19 1
566 574.33 atmosphere 995 43200 < th dose independent rect. 21 12
587 574.93 radiation 1 1440 > th dose dependent rect. 15 21
588 574.99 radiation 1 1440 > th dose dependent rect. 13 23
589 575.08 radiation 1 1440 > th dose dependent rect. 10 21
658 576.02 radiation 1 1440 > th dose dependent rect. 10 9
677 576.24 atmosphere 1015 43200 < th dose independent rect. 18 2
678 576.24 atmosphere 995 43200 > th dose independent rect. 3 5
686 576.38 radiation 40 1440 < th dose dependent rect. 11 1
725 576.71 radiation 40 1440 < th dose independent rect. 13 23
732 576.79 atmosphere 995 43200 < th dose dependent rect. 17 15
769 577.05 atmosphere 995 43200 < th dose independent rect. 2 6
884 577.10 wind 1 14400 < th dose independent rect. 24 3
888 577.13 atmosphere 995 43200 < th dose dependent rect. 2 6
920 577.28 radiation 10 1440 < th dose dependent rect. 11 20
960 577.37 atmosphere 1015 43200 > th dose dependent rect. 15 7
968 577.44 atmosphere 1015 43200 > th dose dependent rect. 20 1
998 577.60 radiation 30 1440 < th dose independent rect. 15 21