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Os10g0531400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0472) R2 : 0.668
β1 : 4.42 (0.171) R2dD : 0.512 R2D : 0.281
β2 : 0.996 (0.113) R2dC : 0.0517 R2C : -0.00968
β3 : -1.38 (0.182) R2dE : 0.0549 R2E : 0.00149
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.49 (0.107) R2dN8 : 0.222 R2N8 : 0.133
σ : 0.863
deviance : 343.49
__
_____
C
peak time of C : 22
E
wheather : humidity
threshold : 57
memory length : 3433
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
336.47 0.862 12 4.37 0.95 -1.41 -0.415 -2.29 1.49 22.4 58.12 3504 -- --
343.39 0.863 11.9 4.37 0.937 -1.41 -0.458 -- 1.49 22.4 58 3449 -- --
337.14 0.855 12 4.39 0.955 -1.42 -- -2.34 1.49 22.3 58.29 3504 -- --
343.49 0.863 11.9 4.42 0.996 -1.38 -- -- 1.49 22 57 3433 -- --
388.5 0.918 11.9 4.37 -- -1.3 -- -2.08 1.5 -- 58.05 2974 -- --
386.75 0.922 11.9 4.14 0.843 -- -0.683 -- 1.78 22.6 -- -- -- --
388.61 0.923 11.9 4.17 0.849 -- -- -- 1.78 22.5 -- -- -- --
391.23 0.921 11.9 4.38 -- -1.27 -- -- 1.47 -- 55.44 4353 -- --
461.92 1 12.1 -- 0.836 -3.77 -- -- 0.908 22.6 59.07 47520 -- --
432.8 0.972 11.8 4.19 -- -- -- -- 1.78 -- -- -- -- --
847.52 1.36 12 -- 0.878 -- -- -- 1.32 22.8 -- -- -- --
504.82 1.05 12 -- -- -3.79 -- -- 0.908 -- 59.25 47520 -- --
895.28 1.4 11.9 -- -- -- -- -- 1.32 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 310.44 wind 1.0 14400 < th dose dependent rect. 24 4
2 312.12 wind 1.0 14400 < th dose dependent rect. 1 1
5 313.54 wind 1.0 14400 < th dose independent rect. 24 3
7 318.86 wind 1.0 14400 > th dose independent rect. 24 3
15 323.79 wind 1.0 14400 > th dose independent rect. 1 1
21 324.93 wind 1.0 43200 < th dose dependent rect. 12 1
23 326.35 wind 9.0 43200 > th dose independent rect. 15 3
24 326.41 wind 9.0 43200 < th dose independent rect. 15 3
25 326.63 wind 7.0 43200 > th dose dependent rect. 15 14
26 326.69 radiation 40.0 43200 > th dose independent rect. 13 2
29 327.18 radiation 40.0 43200 > th dose independent rect. 13 19
30 327.20 wind 7.0 43200 < th dose independent rect. 16 13
47 327.37 wind 9.0 43200 > th dose dependent rect. 15 5
48 327.42 wind 7.0 43200 > th dose independent rect. 16 13
50 327.54 wind 9.0 43200 < th dose independent rect. 15 5
52 327.73 wind 9.0 43200 < th dose independent rect. 15 15
57 327.88 wind 1.0 43200 > th dose independent rect. 8 1
63 328.06 wind 9.0 43200 > th dose independent rect. 15 5
65 328.12 wind 9.0 43200 < th dose independent rect. 15 8
71 328.36 wind 9.0 43200 < th dose independent rect. 15 11
83 328.61 atmosphere 995.0 43200 < th dose dependent sin 15 NA
85 328.73 wind 9.0 43200 > th dose independent rect. 15 11
98 328.95 wind 9.0 43200 > th dose independent rect. 15 8
99 328.98 wind 7.0 43200 > th dose independent rect. 18 2
100 328.98 radiation 10.0 43200 < th dose dependent rect. 7 1
106 329.01 atmosphere 995.0 43200 < th dose dependent rect. 13 17
108 329.02 wind 9.0 43200 > th dose dependent rect. 15 2
112 329.09 wind 1.0 14400 < th dose dependent rect. 24 9
121 329.49 wind 7.0 43200 > th dose dependent rect. 15 9
139 330.26 wind 1.0 43200 < th dose dependent rect. 8 1
149 330.91 radiation 10.0 43200 < th dose dependent rect. 6 4
161 331.33 wind 7.0 43200 < th dose independent rect. 19 1
182 331.87 atmosphere 995.0 43200 > th dose independent rect. 18 16
183 331.87 wind 1.0 4320 < th dose dependent rect. 3 4
194 332.18 wind 7.0 43200 < th dose independent sin 13 NA
202 332.32 wind 1.0 14400 > th dose independent rect. 24 7
215 332.50 wind 7.0 43200 > th dose independent sin 13 NA
224 332.66 atmosphere 995.0 43200 > th dose independent sin 10 NA
225 332.70 atmosphere 995.0 43200 < th dose independent sin 10 NA
227 332.70 wind 1.0 14400 < th dose independent rect. 24 7
229 332.73 radiation 40.0 43200 > th dose independent sin 14 NA
230 332.73 wind 1.0 14400 < th dose dependent sin 9 NA
231 332.78 wind 3.0 14400 < th dose dependent rect. 6 3
232 332.80 radiation 20.0 43200 > th dose independent rect. 15 1
236 332.84 wind 1.0 14400 < th dose independent rect. 24 9
240 332.87 radiation 20.0 43200 > th dose independent sin 17 NA
242 332.89 wind 1.0 14400 > th dose independent rect. 24 9
243 332.94 wind 7.0 43200 > th dose dependent rect. 17 3
278 333.15 radiation 20.0 43200 > th dose independent rect. 9 8
302 333.27 atmosphere 995.0 43200 < th dose independent rect. 18 16
398 333.82 wind 5.0 14400 < th dose dependent rect. 8 1
423 333.94 wind 1.0 14400 < th dose dependent rect. 16 17
479 334.43 wind 7.0 43200 > th dose dependent sin 13 NA
486 334.51 radiation 20.0 43200 > th dose independent rect. 14 22
502 334.53 wind 9.0 43200 > th dose independent rect. 10 8
540 334.98 humidity 60.0 4320 > th dose independent rect. 16 1
544 335.01 radiation 10.0 43200 > th dose independent rect. 7 1
545 335.02 wind 9.0 43200 < th dose independent rect. 10 8
563 335.04 wind 3.0 14400 > th dose independent rect. 6 4
569 335.09 wind 9.0 43200 > th dose independent rect. 11 19
574 335.11 radiation 20.0 43200 < th dose independent rect. 9 1
580 335.16 wind 3.0 14400 < th dose independent rect. 6 4
581 335.17 atmosphere 995.0 43200 < th dose independent rect. 17 18
590 335.25 wind 1.0 14400 > th dose independent rect. 14 1
592 335.27 wind 3.0 14400 > th dose independent rect. 6 1
599 335.29 humidity 60.0 4320 < th dose dependent rect. 14 20
609 335.39 wind 9.0 43200 > th dose independent sin 16 NA
619 335.43 humidity 60.0 4320 < th dose dependent rect. 14 3
633 335.46 wind 9.0 43200 < th dose independent rect. 11 19
646 335.49 wind 9.0 43200 > th dose independent rect. 11 15
650 335.51 wind 3.0 14400 < th dose dependent rect. 3 7
652 335.52 wind 9.0 43200 > th dose independent rect. 10 13
654 335.53 wind 9.0 43200 > th dose dependent rect. 11 19
675 335.57 radiation 20.0 43200 > th dose independent no NA NA
795 335.69 radiation 20.0 43200 > th dose independent rect. 9 1
804 335.74 wind 9.0 43200 < th dose independent rect. 11 13
806 335.75 radiation 10.0 43200 > th dose independent rect. 16 18
824 335.82 wind 9.0 43200 < th dose independent rect. 11 15
836 335.87 precipitation 0.1 14400 > th dose independent rect. 6 12
860 335.96 wind 3.0 14400 < th dose independent rect. 6 1
861 335.96 precipitation 0.1 14400 < th dose independent rect. 6 12
863 335.96 precipitation 0.1 14400 < th dose dependent rect. 6 12
965 336.20 humidity 70.0 4320 < th dose dependent rect. 16 1