Os10g0531300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glutathione transferase (EC 2.5.1.18).
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Os10g0531300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glutathione transferase (EC 2.5.1.18).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 262.4 | 0.754 | 3.94 | 2.55 | 1.1 | 0.709 | 1.82 | 3.55 | 0.38 | 12.3 | 10 | 5561 | -- | -- |
| 266.87 | 0.761 | 3.98 | 2.75 | 1.08 | 0.659 | 1.69 | -- | 0.487 | 12.3 | 20.01 | 6990 | -- | -- |
| 271.47 | 0.767 | 3.94 | 2.56 | 1.02 | 0.935 | -- | 4.09 | 0.364 | 12.6 | 9.311 | 5472 | -- | -- |
| 279.57 | 0.779 | 4 | 2.87 | 1.07 | 0.63 | -- | -- | 0.447 | 12.2 | 20.17 | 12943 | -- | -- |
| 306.37 | 0.82 | 4.06 | 2.75 | -- | -0.735 | -- | -1.12 | 0.246 | -- | 4.867 | 5456 | -- | -- |
| 279.41 | 0.784 | 4.04 | 2.71 | 1.13 | -- | 1.91 | -- | 0.251 | 12.3 | -- | -- | -- | -- |
| 295.2 | 0.805 | 4.04 | 2.78 | 1.12 | -- | -- | -- | 0.26 | 12.3 | -- | -- | -- | -- |
| 314.43 | 0.829 | 4.06 | 2.79 | -- | -0.743 | -- | -- | 0.255 | -- | 4.867 | 5456 | -- | -- |
| 376.88 | 0.904 | 4.19 | -- | 0.922 | 1.92 | -- | -- | -0.409 | 12.2 | 59.68 | 47474 | -- | -- |
| 373.99 | 0.904 | 4.06 | 2.75 | -- | -- | -- | -- | 0.243 | -- | -- | -- | -- | -- |
| 499.62 | 1.05 | 4.11 | -- | 1.08 | -- | -- | -- | -0.05 | 12.2 | -- | -- | -- | -- |
| 451.93 | 0.99 | 4.22 | -- | -- | 1.75 | -- | -- | -0.489 | -- | 59.96 | 47520 | -- | -- |
| 573.14 | 1.12 | 4.13 | -- | -- | -- | -- | -- | -0.0623 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 253.78 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 3 | 254.22 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 4 | 254.29 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 5 |
| 5 | 254.35 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 7 | 254.43 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 8 | 254.52 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 15 | 254.83 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 2 | 4 |
| 32 | 255.01 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 40 | 255.12 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 24 | 10 |
| 46 | 255.20 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 22 | 12 |
| 54 | 255.28 | wind | 5.0 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 55 | 255.28 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 59 | 255.29 | wind | 5.0 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 60 | 255.30 | wind | 5.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 61 | 255.30 | wind | 5.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 93 | 255.54 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 24 | 9 |
| 110 | 255.64 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 14 |
| 130 | 255.73 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 14 |
| 132 | 255.73 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 2 | 7 |
| 153 | 255.77 | wind | 5.0 | 43200 | < th | dose independent | rect. | 24 | 11 |
| 182 | 255.86 | wind | 5.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 192 | 255.88 | wind | 5.0 | 43200 | > th | dose independent | rect. | 24 | 11 |
| 209 | 255.94 | wind | 5.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 215 | 255.95 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 14 | 12 |
| 244 | 256.01 | wind | 3.0 | 43200 | > th | dose dependent | sin | 8 | NA |
| 312 | 256.22 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 335 | 256.28 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 399 | 256.48 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 405 | 256.52 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 428 | 256.59 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 619 | 257.19 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 621 | 257.20 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 629 | 257.22 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 659 | 257.31 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 687 | 257.40 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 723 | 257.54 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 8 |
| 725 | 257.54 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 728 | 257.55 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 3 |
| 729 | 257.55 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 6 |
| 731 | 257.55 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 10 |
| 737 | 257.56 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 752 | 257.60 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 754 | 257.61 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 17 | 10 |
| 762 | 257.63 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 772 | 257.65 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 773 | 257.65 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 775 | 257.65 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 4 |
| 797 | 257.72 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 14 | 4 |
| 812 | 257.77 | wind | 5.0 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 828 | 257.81 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 847 | 257.83 | wind | 3.0 | 43200 | > th | dose independent | rect. | 24 | 6 |
| 852 | 257.84 | humidity | 60.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 855 | 257.84 | wind | 9.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 883 | 257.89 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 891 | 257.91 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 989 | 258.15 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |