Os10g0530600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glutathione S-transferase GST 20 (EC 2.5.1.18).
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Os10g0530600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glutathione S-transferase GST 20 (EC 2.5.1.18).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 401.72 | 0.942 | 3.18 | 0.457 | 0.518 | 0.56 | -0.514 | -2.6 | 0.286 | 2.42 | 70.39 | 1472 | -- | -- |
| 416.58 | 0.951 | 3.21 | 0.284 | 0.502 | 0.639 | -0.623 | -- | 0.197 | 2.31 | 74 | 1538 | -- | -- |
| 402.62 | 0.935 | 3.17 | 0.478 | 0.51 | 0.579 | -- | -2.65 | 0.293 | 2.24 | 70.26 | 1478 | -- | -- |
| 416.27 | 0.95 | 3.23 | 0.135 | 0.515 | 0.533 | -- | -- | 0.181 | 1.72 | 74 | 1540 | -- | -- |
| 415.98 | 0.95 | 3.17 | 0.494 | -- | 0.741 | -- | -2.81 | 0.322 | -- | 72 | 1567 | -- | -- |
| 421.4 | 0.962 | 3.24 | -0.0261 | 0.572 | -- | -0.74 | -- | 0.108 | 2.37 | -- | -- | -- | -- |
| 423.35 | 0.964 | 3.24 | -0.00559 | 0.568 | -- | -- | -- | 0.112 | 2.18 | -- | -- | -- | -- |
| 423.58 | 0.963 | 3.24 | 0.053 | -- | 0.434 | -- | -- | 0.13 | -- | 74 | 1540 | -- | -- |
| 416.07 | 0.95 | 3.23 | -- | 0.516 | 0.467 | -- | -- | 0.159 | 2.13 | 73.98 | 1527 | -- | -- |
| 442.62 | 0.983 | 3.24 | 0.0182 | -- | -- | -- | -- | 0.126 | -- | -- | -- | -- | -- |
| 423.35 | 0.962 | 3.24 | -- | 0.568 | -- | -- | -- | 0.113 | 2.18 | -- | -- | -- | -- |
| 423.65 | 0.962 | 3.24 | -- | -- | 0.433 | -- | -- | 0.124 | -- | 74 | 1540 | -- | -- |
| 442.63 | 0.982 | 3.24 | -- | -- | -- | -- | -- | 0.124 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 391.63 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 2 | 391.63 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 3 | 396.72 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 4 |
| 4 | 396.72 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 6 |
| 6 | 396.98 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 7 | 396.98 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 4 |
| 11 | 397.07 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 12 | 397.12 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 15 | 397.22 | humidity | 50.0 | 30 | < th | dose independent | rect. | 15 | 3 |
| 51 | 397.28 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 52 | 397.34 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 53 | 397.34 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 54 | 397.36 | humidity | 50.0 | 30 | < th | dose dependent | rect. | 15 | 3 |
| 91 | 397.39 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 92 | 397.39 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 6 |
| 93 | 397.41 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 166 | 397.53 | wind | 1.0 | 10 | < th | dose independent | rect. | 14 | 2 |
| 168 | 397.53 | wind | 1.0 | 10 | < th | dose dependent | rect. | 14 | 2 |
| 241 | 398.30 | humidity | 50.0 | 90 | < th | dose dependent | sin | 12 | NA |
| 244 | 398.36 | atmosphere | 1005.0 | 30 | < th | dose dependent | rect. | 1 | 10 |
| 263 | 399.18 | humidity | 50.0 | 90 | < th | dose independent | sin | 12 | NA |
| 279 | 400.77 | humidity | 80.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 290 | 401.06 | humidity | 50.0 | 90 | > th | dose independent | sin | 12 | NA |
| 295 | 401.31 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 8 |
| 296 | 401.33 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 300 | 401.44 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 9 |
| 301 | 401.51 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 302 | 401.52 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 305 | 401.56 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 6 | 12 |
| 306 | 401.56 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 4 | 14 |
| 315 | 401.59 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 21 | 21 |
| 319 | 401.62 | humidity | 70.0 | 1440 | > th | dose independent | sin | 0 | NA |
| 320 | 401.62 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 322 | 401.65 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 324 | 401.66 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 355 | 401.74 | humidity | 70.0 | 1440 | < th | dose independent | sin | 1 | NA |
| 367 | 401.75 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 375 | 401.87 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 377 | 401.92 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 13 |
| 378 | 401.92 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 6 | 16 |
| 379 | 401.92 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 4 | 18 |
| 431 | 401.96 | humidity | 70.0 | 1440 | > th | dose independent | no | NA | NA |
| 482 | 402.10 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 485 | 402.11 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 12 | 23 |
| 498 | 402.20 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 521 | 402.23 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 4 | 6 |
| 555 | 402.30 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 631 | 402.43 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 635 | 402.45 | wind | 1.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 651 | 402.48 | humidity | 70.0 | 1440 | < th | dose independent | no | NA | NA |
| 703 | 402.48 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 746 | 402.60 | radiation | 40.0 | 1440 | > th | dose independent | sin | 20 | NA |
| 756 | 402.67 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 793 | 402.73 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 799 | 402.75 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 12 | 4 |
| 809 | 402.78 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 5 | 1 |
| 885 | 402.93 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 889 | 402.98 | radiation | 40.0 | 1440 | > th | dose independent | no | NA | NA |