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Os10g0530400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Glutathione-S-transferase Cla47.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 15.3 (0.0202) R2 : 0.606
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.34 (0.0527) R2dC : 0.563 R2C : 0.554
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.288 (0.0425) R2dN8 : 0.0513 R2N8 : 0.0427
σ : 0.381
deviance : 66.45
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_____
C
peak time of C : 6.87
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
45.93 0.318 15.3 -0.882 1.36 -0.595 1.16 0.489 0.118 6.94 1.803 1408 -- --
45.88 0.315 15.3 -0.861 1.43 -0.746 1.13 -- 0.107 7.13 0.2898 1357 -- --
49.3 0.327 15.3 -0.868 1.39 -0.606 -- 0.547 0.118 7.09 1.218 1376 -- --
49.32 0.327 15.3 -0.85 1.43 -0.795 -- -- 0.123 7.17 0.2715 1356 -- --
70.57 0.391 15.4 -1.05 -- 1.52 -- 1.68 0.0928 -- 1.619 781 -- --
51.58 0.337 15.3 -0.675 1.35 -- 1.19 -- 0.219 6.81 -- -- -- --
55.17 0.348 15.3 -0.654 1.35 -- -- -- 0.216 6.84 -- -- -- --
68.73 0.386 15.3 -0.552 -- 1.65 -- -- 0.291 -- 3.82 796 -- --
64.65 0.377 15.3 -- 1.48 0.279 -- -- 0.295 7.67 0.2715 1356 -- --
150.47 0.573 15.3 -0.625 -- -- -- -- 0.241 -- -- -- -- --
66.45 0.381 15.3 -- 1.34 -- -- -- 0.288 6.87 -- -- -- --
76.72 0.408 15.3 -- -- 1.7 -- -- 0.351 -- 2.802 817 -- --
160.78 0.592 15.3 -- -- -- -- -- 0.311 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 42.54 humidity 90.0 720 > th dose dependent rect. 20 4
2 42.67 humidity 90.0 720 > th dose dependent rect. 21 2
14 43.88 humidity 90.0 720 > th dose independent rect. 21 2
21 44.20 radiation 40.0 90 < th dose independent rect. 17 22
26 44.31 humidity 70.0 270 < th dose independent rect. 13 1
32 44.43 radiation 40.0 270 < th dose independent rect. 9 12
33 44.44 radiation 40.0 270 > th dose independent rect. 13 1
35 44.49 humidity 90.0 720 > th dose dependent rect. 10 15
50 44.72 precipitation 0.1 90 < th dose independent rect. 15 2
51 44.72 temperature 15.0 90 > th dose independent rect. 17 22
52 44.72 precipitation 0.1 90 < th dose dependent rect. 15 2
53 44.73 precipitation 0.1 270 > th dose independent rect. 1 3
54 44.73 radiation 10.0 270 > th dose dependent rect. 13 1
56 44.74 humidity 90.0 90 < th dose independent rect. 15 2
60 44.76 precipitation 0.1 270 > th dose dependent rect. 1 3
61 44.77 humidity 50.0 720 > th dose dependent rect. 20 5
62 44.77 temperature 10.0 90 > th dose dependent rect. 17 21
68 44.82 humidity 50.0 720 > th dose dependent rect. 18 7
69 44.83 radiation 1.0 90 > th dose independent rect. 15 2
80 44.91 radiation 40.0 270 < th dose independent sin 13 NA
83 44.94 wind 9.0 90 < th dose independent rect. 15 2
88 44.96 radiation 40.0 270 < th dose independent sin 15 NA
90 44.97 precipitation 0.1 720 < th dose independent rect. 17 12
91 44.97 precipitation 0.1 720 < th dose dependent rect. 17 12
96 45.01 radiation 1.0 1440 > th dose independent rect. 13 17
97 45.01 radiation 40.0 270 > th dose independent rect. 13 21
98 45.01 precipitation 0.1 90 < th dose independent rect. 17 22
99 45.01 precipitation 0.1 90 < th dose dependent rect. 17 22
103 45.04 radiation 1.0 1440 < th dose independent rect. 13 17
105 45.05 temperature 10.0 90 > th dose independent rect. 15 2
107 45.05 atmosphere 1010.0 90 < th dose independent rect. 15 2
112 45.06 wind 1.0 90 > th dose independent rect. 15 2
127 45.11 radiation 40.0 90 < th dose independent rect. 15 2
143 45.18 radiation 40.0 90 < th dose dependent rect. 17 21
155 45.23 wind 9.0 90 < th dose independent rect. 17 22
162 45.25 atmosphere 995.0 90 > th dose independent rect. 15 2
172 45.28 atmosphere 995.0 90 > th dose independent rect. 17 21
191 45.33 temperature 10.0 90 > th dose dependent rect. 14 3
202 45.39 precipitation 0.1 720 < th dose independent rect. 17 20
203 45.39 precipitation 0.1 720 < th dose dependent rect. 17 20
204 45.40 radiation 1.0 1440 > th dose independent sin 15 NA
235 45.44 radiation 20.0 14400 < th dose independent rect. 18 12
238 45.44 radiation 40.0 270 < th dose dependent rect. 9 12
240 45.44 radiation 20.0 270 > th dose dependent rect. 12 22
241 45.45 radiation 1.0 1440 < th dose independent sin 15 NA
243 45.46 radiation 1.0 1440 > th dose independent rect. 13 6
272 45.48 radiation 1.0 1440 < th dose dependent rect. 12 18
289 45.50 radiation 1.0 1440 < th dose independent rect. 14 5
303 45.50 atmosphere 1015.0 90 < th dose dependent rect. 15 2
308 45.51 precipitation 0.1 270 < th dose independent rect. 2 11
312 45.51 precipitation 0.1 10 < th dose independent rect. 18 20
314 45.51 precipitation 0.1 270 < th dose dependent rect. 2 11
315 45.51 precipitation 0.1 10 < th dose dependent rect. 18 20
323 45.53 radiation 1.0 1440 < th dose independent rect. 14 13
381 45.59 temperature 10.0 720 > th dose dependent rect. 17 3
382 45.60 radiation 1.0 1440 < th dose independent rect. 14 3
425 45.63 wind 1.0 90 > th dose dependent rect. 14 3
427 45.64 radiation 1.0 1440 > th dose independent rect. 14 3
433 45.64 humidity 90.0 270 < th dose dependent rect. 13 2
438 45.65 humidity 90.0 720 > th dose dependent sin 18 NA
444 45.66 radiation 40.0 270 > th dose independent sin 13 NA
449 45.66 temperature 10.0 90 > th dose dependent rect. 18 13
453 45.67 radiation 40.0 270 > th dose independent sin 15 NA
474 45.70 humidity 90.0 720 < th dose dependent rect. 18 2
475 45.70 radiation 1.0 90 > th dose dependent rect. 15 2
506 45.72 radiation 40.0 10 < th dose dependent rect. 18 20
519 45.73 wind 1.0 30 > th dose independent rect. 1 17
532 45.74 humidity 50.0 90 > th dose independent rect. 17 21
583 45.78 radiation 1.0 1440 < th dose dependent sin 15 NA
585 45.78 radiation 1.0 1440 < th dose dependent rect. 13 6
642 45.82 radiation 1.0 1440 < th dose dependent rect. 13 11
665 45.84 temperature 15.0 270 > th dose independent rect. 2 10
681 45.86 temperature 20.0 30 > th dose independent rect. 4 10
718 45.88 wind 5.0 14400 < th dose independent rect. 11 1
746 45.91 precipitation 0.1 270 < th dose independent rect. 15 22
751 45.91 precipitation 0.1 270 < th dose dependent rect. 15 22
767 45.92 wind 1.0 10 > th dose dependent rect. 14 4
774 45.93 temperature 15.0 270 > th dose independent rect. 15 22
783 45.94 radiation 30.0 270 > th dose dependent sin 15 NA
791 45.95 temperature 25.0 10 < th dose dependent rect. 24 9
795 45.96 wind 9.0 10 < th dose independent rect. 14 4
838 45.98 radiation 1.0 1440 < th dose dependent rect. 14 3
884 46.02 radiation 10.0 90 < th dose independent sin 14 NA
886 46.02 wind 9.0 270 < th dose independent rect. 12 14
909 46.04 radiation 40.0 270 < th dose independent rect. 2 11
926 46.04 temperature 30.0 270 < th dose dependent rect. 22 10
991 46.07 atmosphere 995.0 90 > th dose dependent rect. 15 2
998 46.08 humidity 50.0 90 > th dose independent rect. 15 2