Os10g0529800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Tau class GST protein 4.
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Os10g0529800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Tau class GST protein 4.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.61 | 0.357 | 13.6 | -0.599 | 0.651 | 1.12 | 0.754 | -0.316 | 0.483 | 23.6 | 21.4 | 2901 | -- | -- |
| 57.79 | 0.354 | 13.6 | -0.522 | 0.653 | 1.15 | 0.756 | -- | 0.503 | 23.6 | 21.3 | 2900 | -- | -- |
| 60.06 | 0.361 | 13.6 | -0.617 | 0.645 | 1.12 | -- | -0.298 | 0.483 | 23.6 | 21.39 | 2898 | -- | -- |
| 60.23 | 0.361 | 13.6 | -0.54 | 0.645 | 1.15 | -- | -- | 0.502 | 23.7 | 21.4 | 2848 | -- | -- |
| 83.07 | 0.424 | 13.6 | -0.515 | -- | 1.15 | -- | -0.096 | 0.488 | -- | 21.7 | 2421 | -- | -- |
| 91.56 | 0.449 | 13.5 | 0.087 | 0.684 | -- | 0.701 | -- | 0.857 | 23.8 | -- | -- | -- | -- |
| 93.68 | 0.453 | 13.5 | 0.0583 | 0.681 | -- | -- | -- | 0.853 | 23.9 | -- | -- | -- | -- |
| 82.98 | 0.424 | 13.6 | -0.522 | -- | 1.21 | -- | -- | 0.499 | -- | 21.4 | 2441 | -- | -- |
| 63.27 | 0.37 | 13.6 | -- | 0.683 | 0.929 | -- | -- | 0.582 | 23.8 | 22.2 | 1498 | -- | -- |
| 122.88 | 0.518 | 13.5 | 0.0787 | -- | -- | -- | -- | 0.862 | -- | -- | -- | -- | -- |
| 93.77 | 0.453 | 13.5 | -- | 0.682 | -- | -- | -- | 0.847 | 23.9 | -- | -- | -- | -- |
| 83.73 | 0.426 | 13.5 | -- | -- | 0.968 | -- | -- | 0.528 | -- | 24.78 | 970 | -- | -- |
| 123.04 | 0.518 | 13.5 | -- | -- | -- | -- | -- | 0.854 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.37 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 2 | 55.52 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 7 | 55.87 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 20 | 56.43 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 41 | 56.92 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 108 | 57.61 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 3 |
| 125 | 57.79 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 190 | 58.20 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 8 |
| 212 | 58.28 | temperature | 20 | 4320 | > th | dose independent | sin | 13 | NA |
| 220 | 58.30 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 8 |
| 237 | 58.37 | temperature | 20 | 4320 | < th | dose independent | sin | 13 | NA |
| 537 | 59.30 | temperature | 25 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 601 | 59.48 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 613 | 59.53 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 735 | 59.88 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 810 | 60.06 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 813 | 60.06 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 821 | 60.07 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 833 | 60.08 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 837 | 60.09 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 839 | 60.10 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 895 | 60.27 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |