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Os10g0529700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Glutathione S-transferase GST 35 (EC 2.5.1.18).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.86 (0.0635) R2 : 0.845
β1 : 3.36 (0.278) R2dD : 0.0913 R2D : -0.0411
β2 : 6.76 (0.144) R2dC : 0.725 R2C : 0.688
β3 : -3.77 (0.214) R2dE : 0.145 R2E : 0.0482
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 2.74 (0.703) R2dD*E : 0.00971 R2D*E : -0.00798
γ1 : 0.5 (0.138) R2dN8 : 0.0082 R2N8 : -0.0291
σ : 1.08
deviance : 538.16
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_____
C
peak time of C : 8.9
E
wheather : temperature
threshold : 19.65
memory length : 1672
response mode : > th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 4.17
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
546.5 1.1 8.84 3.4 6.78 -3.69 -0.0555 2.89 0.565 9.11 19.9 1573 1.76 --
565.92 1.11 8.83 2.83 6.53 -3.88 -0.0397 -- 0.609 9.1 19.7 1633 4.36 --
538.16 1.08 8.86 3.36 6.76 -3.77 -- 2.74 0.5 8.9 19.65 1672 4.17 --
557.52 1.1 8.82 3.07 6.31 -4.28 -- -- 0.625 8.92 19.7 1671 5.78 --
1795.07 1.97 9.06 7.34 -- -7.04 -- -0.539 0.956 -- 18.1 2180 13.7 --
960.28 1.45 9.16 1.08 6.48 -- 0.545 -- -0.548 9.4 -- -- -- --
961.36 1.45 9.16 1.1 6.48 -- -- -- -0.548 9.39 -- -- -- --
798.98 1.32 9.23 4.07 -- -12.4 -- -- 0.335 -- 18.1 2049 13.6 --
668.31 1.2 9.04 -- 5.63 -3.35 -- -- 0.123 9.28 22.34 1868 11.3 --
3419.82 2.73 9.34 1.07 -- -- -- -- -0.525 -- -- -- -- --
993.36 1.47 9.19 -- 6.48 -- -- -- -0.67 9.38 -- -- -- --
911 1.41 9.23 -- -- -6.41 -- -- -0.898 -- 19.3 376 11.3 --
3449.76 2.74 9.37 -- -- -- -- -- -0.643 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 546.37 temperature 20.0 1440 > th dose independent rect. 5 2
2 549.97 temperature 20.0 1440 < th dose independent rect. 5 2
3 552.48 temperature 25.0 1440 < th dose dependent rect. 5 3
4 553.84 temperature 25.0 1440 < th dose dependent rect. 6 1
6 554.08 temperature 20.0 1440 < th dose independent rect. 3 5
7 554.49 temperature 20.0 1440 > th dose independent rect. 3 5
8 554.55 temperature 25.0 1440 < th dose dependent rect. 3 6
9 554.74 precipitation 0.1 43200 > th dose independent rect. 2 6
13 555.23 precipitation 0.1 43200 < th dose independent rect. 2 6
14 555.23 precipitation 0.1 43200 < th dose dependent rect. 2 6
17 556.64 precipitation 0.1 43200 > th dose dependent rect. 2 6
28 558.08 temperature 15.0 1440 > th dose dependent rect. 3 5
37 558.80 temperature 15.0 1440 > th dose dependent rect. 5 2
79 561.34 temperature 30.0 90 < th dose dependent sin 11 NA
104 562.58 temperature 15.0 90 > th dose dependent sin 11 NA
146 565.26 radiation 1.0 14400 < th dose independent rect. 24 8
153 565.49 radiation 1.0 14400 < th dose independent rect. 2 6
157 565.59 radiation 1.0 14400 < th dose independent rect. 4 4
162 565.67 temperature 20.0 1440 < th dose independent rect. 22 12
164 565.69 radiation 1.0 14400 > th dose independent rect. 4 4
174 565.70 temperature 20.0 4320 > th dose independent rect. 15 13
199 566.05 temperature 20.0 4320 > th dose independent rect. 16 11
209 566.14 temperature 20.0 4320 < th dose independent rect. 15 13
210 566.18 temperature 20.0 4320 < th dose independent rect. 16 11
220 566.30 radiation 1.0 14400 > th dose independent rect. 4 8
232 566.37 radiation 1.0 14400 < th dose independent rect. 24 12
233 566.38 radiation 1.0 14400 > th dose independent sin 8 NA
234 566.40 temperature 20.0 1440 > th dose independent rect. 22 13
239 566.49 temperature 30.0 270 < th dose dependent sin 13 NA
242 566.54 radiation 1.0 14400 < th dose independent rect. 2 10
243 566.55 temperature 20.0 1440 > th dose independent sin 6 NA
248 566.59 precipitation 0.1 43200 > th dose independent rect. 6 2
251 566.62 radiation 1.0 14400 < th dose independent rect. 4 8
256 566.71 precipitation 0.1 43200 < th dose independent rect. 5 4
257 566.71 precipitation 0.1 43200 < th dose dependent rect. 5 4
259 566.74 radiation 1.0 14400 < th dose independent sin 7 NA
269 566.91 precipitation 0.1 43200 > th dose dependent rect. 6 2
293 567.13 precipitation 0.1 43200 > th dose independent rect. 5 4
295 567.16 precipitation 0.1 43200 > th dose dependent rect. 5 4
297 567.21 temperature 20.0 4320 > th dose independent sin 15 NA
300 567.22 temperature 20.0 4320 < th dose independent sin 15 NA
329 567.44 temperature 20.0 1440 < th dose independent sin 6 NA
349 567.67 precipitation 0.1 43200 > th dose independent rect. 23 9
430 568.65 precipitation 0.1 43200 > th dose dependent rect. 23 9
434 568.74 precipitation 0.1 43200 < th dose independent rect. 23 9
435 568.74 precipitation 0.1 43200 < th dose dependent rect. 23 9
464 569.21 temperature 25.0 4320 < th dose dependent rect. 22 1
482 569.61 temperature 25.0 1440 < th dose dependent sin 8 NA
551 570.55 temperature 20.0 4320 < th dose independent rect. 14 17
564 570.67 temperature 15.0 4320 > th dose dependent rect. 22 1
580 570.94 temperature 20.0 4320 > th dose independent rect. 13 18
629 571.67 temperature 20.0 4320 > th dose independent rect. 14 20
631 571.68 temperature 25.0 4320 < th dose dependent rect. 10 21
703 572.17 temperature 25.0 4320 < th dose dependent rect. 13 15
704 572.21 temperature 25.0 4320 < th dose dependent sin 15 NA
710 572.28 temperature 20.0 4320 > th dose independent rect. 9 22
716 572.32 temperature 25.0 4320 < th dose dependent rect. 11 17
729 572.42 temperature 20.0 4320 < th dose independent rect. 9 22
822 572.90 wind 3.0 43200 < th dose dependent rect. 23 1
831 572.94 temperature 25.0 4320 < th dose dependent rect. 17 23
836 572.96 temperature 25.0 4320 < th dose dependent rect. 5 23
841 572.99 temperature 25.0 4320 < th dose dependent rect. 19 21
842 572.99 temperature 25.0 4320 < th dose dependent rect. 13 23
865 573.10 temperature 25.0 4320 < th dose dependent rect. 2 23
891 573.25 temperature 25.0 4320 < th dose dependent no NA NA
909 573.30 temperature 20.0 4320 > th dose independent rect. 5 23
944 573.54 temperature 15.0 1440 > th dose dependent sin 9 NA
979 573.76 temperature 25.0 4320 < th dose dependent rect. 17 8