Os10g0529600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0529600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 437.07 | 0.982 | 6 | 3.54 | 3.95 | 3.84 | 0.992 | -0.767 | 0.348 | 8.72 | 24.12 | 4040 | -- | -- |
| 438.18 | 0.975 | 6.01 | 3.36 | 3.97 | 3.81 | 0.915 | -- | 0.317 | 8.74 | 23.9 | 4076 | -- | -- |
| 440.28 | 0.977 | 6 | 3.56 | 3.95 | 3.84 | -- | -0.72 | 0.346 | 8.73 | 24 | 4059 | -- | -- |
| 441.13 | 0.978 | 6.02 | 3.4 | 3.97 | 3.83 | -- | -- | 0.3 | 8.69 | 23.9 | 4076 | -- | -- |
| 1155.07 | 1.58 | 6.08 | 3.57 | -- | 4.96 | -- | -1.22 | 0.555 | -- | 30.19 | 2157 | -- | -- |
| 697.77 | 1.24 | 6.26 | 1.36 | 3.99 | -- | 1.1 | -- | -0.723 | 8.91 | -- | -- | -- | -- |
| 701.88 | 1.24 | 6.26 | 1.39 | 3.98 | -- | -- | -- | -0.723 | 8.9 | -- | -- | -- | -- |
| 866.7 | 1.37 | 6.14 | 3.08 | -- | 6.91 | -- | -- | 0.34 | -- | 48.2 | 673 | -- | -- |
| 598.97 | 1.14 | 6.23 | -- | 3.28 | 3.48 | -- | -- | -0.446 | 9.54 | 234.5 | 464 | -- | -- |
| 1608.65 | 1.87 | 6.37 | 1.39 | -- | -- | -- | -- | -0.695 | -- | -- | -- | -- | -- |
| 753.09 | 1.28 | 6.3 | -- | 3.99 | -- | -- | -- | -0.878 | 8.88 | -- | -- | -- | -- |
| 1093.11 | 1.54 | 6.25 | -- | -- | 5.77 | -- | -- | -0.145 | -- | 194.6 | 649 | -- | -- |
| 1659.84 | 1.9 | 6.41 | -- | -- | -- | -- | -- | -0.85 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 400.82 | wind | 7.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 2 | 402.93 | wind | 7.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 3 | 404.77 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 5 | 404.80 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 23 | 9 |
| 12 | 404.82 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 24 | 405.03 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 44 | 405.25 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 7 | 5 |
| 47 | 405.48 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 56 | 407.00 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 19 | 17 |
| 58 | 407.02 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 23 | 13 |
| 62 | 407.04 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 8 |
| 75 | 407.15 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 8 |
| 98 | 407.23 | radiation | 1.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 110 | 407.65 | radiation | 1.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 172 | 410.38 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 24 | 12 |
| 179 | 410.69 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 16 |
| 264 | 414.32 | wind | 7.0 | 43200 | < th | dose independent | rect. | 20 | 16 |
| 280 | 414.77 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 16 |
| 283 | 414.83 | wind | 5.0 | 43200 | > th | dose dependent | sin | 7 | NA |
| 315 | 415.56 | wind | 7.0 | 43200 | < th | dose independent | rect. | 23 | 12 |
| 352 | 416.52 | wind | 7.0 | 43200 | > th | dose independent | rect. | 23 | 12 |
| 402 | 417.83 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 3 |
| 404 | 417.86 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 414 | 418.04 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 415 | 418.04 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 416 | 418.06 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 417 | 418.06 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 432 | 418.47 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 507 | 419.81 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 17 | 7 |
| 511 | 419.97 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 517 | 420.01 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 518 | 420.03 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 17 | 9 |
| 519 | 420.04 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 525 | 420.15 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 526 | 420.15 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 537 | 420.36 | wind | 5.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 544 | 420.55 | wind | 7.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 551 | 420.64 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 19 | 23 |
| 552 | 420.65 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 23 | 19 |
| 556 | 420.66 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 14 |
| 574 | 420.91 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 14 |
| 586 | 421.08 | wind | 7.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 587 | 421.19 | wind | 5.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 612 | 421.41 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 9 |
| 650 | 421.73 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 705 | 422.47 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 765 | 423.56 | radiation | 1.0 | 14400 | > th | dose independent | no | NA | NA |
| 812 | 423.59 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 21 |
| 818 | 423.63 | radiation | 1.0 | 14400 | < th | dose independent | no | NA | NA |
| 834 | 423.64 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 4 |
| 872 | 423.82 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 875 | 423.89 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 876 | 423.91 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 883 | 424.00 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 885 | 424.05 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 10 | 23 |
| 960 | 424.94 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 982 | 425.19 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 7 | 5 |