Os10g0529400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Tau class GST protein 4.
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Os10g0529400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Tau class GST protein 4.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 194.92 | 0.656 | 8.24 | 1.75 | 0.689 | -4.05 | -0.56 | 0.101 | 0.633 | 8.52 | 19.93 | 1448 | -- | -- |
| 194.92 | 0.65 | 8.24 | 1.72 | 0.69 | -4.05 | -0.566 | -- | 0.627 | 8.53 | 19.87 | 1447 | -- | -- |
| 195.66 | 0.651 | 8.24 | 1.77 | 0.69 | -4.03 | -- | 0.222 | 0.642 | 9.01 | 20.1 | 1488 | -- | -- |
| 195.69 | 0.652 | 8.24 | 1.7 | 0.686 | -4.02 | -- | -- | 0.626 | 9.04 | 20.04 | 1488 | -- | -- |
| 203.83 | 0.665 | 8.25 | 1.88 | -- | -4.41 | -- | 0.281 | 0.667 | -- | 20.04 | 2125 | -- | -- |
| 701.34 | 1.24 | 8.46 | 0.198 | 0.749 | -- | -0.181 | -- | -0.331 | 10 | -- | -- | -- | -- |
| 701.46 | 1.24 | 8.46 | 0.191 | 0.749 | -- | -- | -- | -0.331 | 10.1 | -- | -- | -- | -- |
| 203.88 | 0.665 | 8.26 | 1.81 | -- | -4.41 | -- | -- | 0.649 | -- | 19.95 | 2125 | -- | -- |
| 259.85 | 0.751 | 8.31 | -- | 0.689 | -3.4 | -- | -- | 0.317 | 8.88 | 21.23 | 1477 | -- | -- |
| 735.34 | 1.27 | 8.48 | 0.182 | -- | -- | -- | -- | -0.332 | -- | -- | -- | -- | -- |
| 702.43 | 1.24 | 8.46 | -- | 0.748 | -- | -- | -- | -0.353 | 10.1 | -- | -- | -- | -- |
| 272.78 | 0.769 | 8.33 | -- | -- | -3.73 | -- | -- | 0.312 | -- | 21.4 | 2062 | -- | -- |
| 736.21 | 1.27 | 8.48 | -- | -- | -- | -- | -- | -0.352 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 193.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 22 |
| 9 | 194.41 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 2 |
| 12 | 194.53 | temperature | 15 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 14 | 194.68 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 18 | 194.74 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 26 | 194.93 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 30 | 195.03 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 33 | 195.18 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 78 | 196.05 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 4 |
| 129 | 196.54 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 158 | 196.77 | temperature | 15 | 1440 | > th | dose dependent | sin | 4 | NA |
| 331 | 199.11 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 12 |
| 375 | 199.75 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 10 |
| 376 | 199.77 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 6 |
| 428 | 200.50 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 8 |
| 547 | 202.29 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 685 | 205.24 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 10 |
| 779 | 207.28 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 20 |