Os10g0529300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Tau class GST protein 3.
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Os10g0529300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Tau class GST protein 3.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 402.78 | 0.943 | 9.46 | -4.09 | 3.16 | 2.32 | 0.81 | 1.09 | -0.383 | 10.2 | 96.61 | 823 | 19.3 | 1.72 |
| 402.36 | 0.934 | 9.47 | -4.2 | 3.16 | 2.37 | 0.315 | -- | -0.431 | 10.3 | 97.37 | 819 | 19.7 | 0.917 |
| 403.9 | 0.936 | 9.48 | -4.08 | 3.13 | 2.32 | -- | 0.926 | -0.403 | 10.3 | 97.65 | 817 | 19.5 | 1.55 |
| 402.79 | 0.935 | 9.47 | -4.19 | 3.17 | 2.41 | -- | -- | -0.419 | 10.4 | 97.6 | 821 | 19.7 | 0.962 |
| 490.49 | 1.03 | 9.47 | -4.37 | -- | 3.79 | -- | -2.42 | -0.358 | -- | 204.7 | 1184 | 15.6 | 14.1 |
| 517.25 | 1.07 | 9.44 | -4.38 | 3.27 | -- | 1.74 | -- | -0.352 | 7.92 | -- | -- | -- | -- |
| 526.14 | 1.07 | 9.44 | -4.33 | 3.27 | -- | -- | -- | -0.354 | 7.95 | -- | -- | -- | -- |
| 440.24 | 0.977 | 9.54 | -4.19 | -- | 4.55 | -- | -- | -0.44 | -- | 162 | 1128 | 15.8 | 14.9 |
| 857.79 | 1.36 | 9.46 | -- | 3.53 | 3.12 | -- | -- | -0.0545 | 11.2 | 100.3 | 820 | 19.5 | 1.33 |
| 1107.2 | 1.55 | 9.52 | -4.3 | -- | -- | -- | -- | -0.311 | -- | -- | -- | -- | -- |
| 1020.28 | 1.49 | 9.33 | -- | 3.24 | -- | -- | -- | 0.128 | 8.04 | -- | -- | -- | -- |
| 891.65 | 1.39 | 9.46 | -- | -- | 5.08 | -- | -- | -0.00982 | -- | 139.8 | 1101 | 16.3 | 14.7 |
| 1594.01 | 1.86 | 9.42 | -- | -- | -- | -- | -- | 0.166 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 427.85 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 3 | 432.35 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 9 |
| 13 | 437.37 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 19 | 437.92 | humidity | 80.0 | 720 | < th | dose independent | rect. | 19 | 2 |
| 24 | 438.56 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 54 | 442.12 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 10 |
| 60 | 442.64 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 18 | 3 |
| 63 | 443.31 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 65 | 443.40 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 3 |
| 66 | 443.53 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 12 | 11 |
| 74 | 443.90 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 12 | 11 |
| 126 | 445.95 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 12 | 8 |
| 131 | 445.98 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 12 | 16 |
| 170 | 446.57 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 12 | 18 |
| 172 | 446.59 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 11 |
| 175 | 446.72 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 180 | 446.93 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 17 | NA |
| 187 | 447.19 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 12 | 18 |
| 194 | 447.27 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 15 |
| 227 | 447.60 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 232 | 447.68 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 14 | NA |
| 256 | 447.91 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 16 | NA |
| 355 | 449.06 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 356 | 449.08 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 425 | 449.76 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 17 | NA |
| 471 | 450.32 | humidity | 90.0 | 720 | < th | dose independent | rect. | 19 | 5 |
| 484 | 450.47 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 10 |
| 545 | 451.17 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 4 | 18 |
| 547 | 451.19 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 16 |
| 562 | 451.36 | humidity | 70.0 | 720 | < th | dose independent | rect. | 18 | 13 |
| 603 | 451.62 | humidity | 80.0 | 1440 | > th | dose independent | sin | 21 | NA |
| 608 | 451.65 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 21 |
| 618 | 451.70 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 11 | 14 |
| 621 | 451.73 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 9 | 16 |
| 708 | 452.27 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 733 | 452.55 | radiation | 10.0 | 1440 | > th | dose independent | sin | 16 | NA |
| 740 | 452.68 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 18 |
| 806 | 453.31 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 13 | 16 |
| 823 | 453.39 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 22 |
| 904 | 453.88 | humidity | 80.0 | 1440 | < th | dose independent | sin | 21 | NA |
| 917 | 453.95 | humidity | 70.0 | 1440 | > th | dose independent | sin | 14 | NA |
| 948 | 454.09 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 4 |
| 965 | 454.33 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 983 | 454.52 | humidity | 70.0 | 1440 | < th | dose independent | sin | 14 | NA |
| 996 | 454.63 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 12 | 2 |