Os10g0528900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Tau class GST protein 3.
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Os10g0528900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Tau class GST protein 3.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 918.37 | 1.42 | 4.77 | -4.74 | 1.16 | 3.23 | -2.47 | -1.04 | -0.648 | 8.11 | 0.9189 | 109 | 3.98 | 0.54 |
| 916.7 | 1.41 | 4.76 | -4.68 | 1.15 | 3.07 | -2.47 | -- | -0.644 | 8.1 | 0.9364 | 114 | 3.98 | 0.55 |
| 932.41 | 1.42 | 4.78 | -4.76 | 1.23 | 3.03 | -- | -1.1 | -0.643 | 7.89 | 0.8 | 112 | 4 | 0.533 |
| 911.12 | 1.41 | 4.76 | -4.75 | 1.21 | 2.97 | -- | -- | -0.647 | 7.88 | 0.7253 | 196 | 4.03 | 0.279 |
| 985.62 | 1.46 | 4.79 | -4.82 | -- | 3.47 | -- | -0.74 | -0.632 | -- | 0.7 | 106 | 4.03 | 0.212 |
| 1081.8 | 1.54 | 4.79 | -4.51 | 1.75 | -- | -1.14 | -- | -0.839 | 7.1 | -- | -- | -- | -- |
| 1084.96 | 1.54 | 4.79 | -4.53 | 1.76 | -- | -- | -- | -0.837 | 6.97 | -- | -- | -- | -- |
| 985.29 | 1.46 | 4.79 | -4.77 | -- | 3.43 | -- | -- | -0.603 | -- | 0.7979 | 199 | 4.06 | 0.267 |
| 1501.23 | 1.8 | 4.67 | -- | 1.23 | 2.51 | -- | -- | -0.162 | 7.94 | 0.745 | 129 | 4.18 | 0.133 |
| 1247.17 | 1.65 | 4.83 | -4.5 | -- | -- | -- | -- | -0.805 | -- | -- | -- | -- | -- |
| 1626.65 | 1.89 | 4.68 | -- | 1.71 | -- | -- | -- | -0.333 | 7.13 | -- | -- | -- | -- |
| 1581.36 | 1.85 | 4.67 | -- | -- | 2.98 | -- | -- | -0.105 | -- | 0.7522 | 141 | 4.16 | 0.127 |
| 1780.71 | 1.97 | 4.72 | -- | -- | -- | -- | -- | -0.306 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 931.23 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 2 | 931.76 | temperature | 25 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 3 | 932.47 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 4 | 939.57 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 20 | 945.87 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 21 | 946.24 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 42 | 958.05 | temperature | 20 | 90 | > th | dose independent | rect. | 4 | 1 |
| 44 | 960.44 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 45 | 960.88 | temperature | 25 | 720 | > th | dose independent | rect. | 21 | 1 |
| 49 | 962.58 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 63 | 963.55 | temperature | 20 | 30 | > th | dose dependent | rect. | 4 | 2 |
| 67 | 965.65 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 97 | 967.47 | humidity | 90 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 112 | 969.41 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 9 |
| 113 | 969.51 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 116 | 969.65 | humidity | 70 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 129 | 970.06 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 11 |
| 130 | 970.18 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 2 |
| 131 | 970.27 | humidity | 90 | 90 | > th | dose independent | rect. | 4 | 1 |
| 153 | 970.55 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 7 |
| 155 | 970.66 | wind | 3 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 216 | 973.39 | humidity | 70 | 1440 | < th | dose dependent | sin | 12 | NA |
| 221 | 973.85 | wind | 3 | 10 | < th | dose dependent | rect. | 4 | 6 |
| 222 | 973.90 | humidity | 60 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 237 | 974.09 | humidity | 70 | 1440 | < th | dose independent | sin | 13 | NA |
| 250 | 974.70 | humidity | 60 | 1440 | > th | dose independent | rect. | 15 | 14 |
| 254 | 974.74 | humidity | 60 | 1440 | > th | dose independent | rect. | 15 | 16 |
| 268 | 975.10 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 8 |
| 384 | 977.18 | humidity | 60 | 1440 | > th | dose independent | sin | 12 | NA |
| 406 | 977.66 | temperature | 30 | 720 | < th | dose independent | rect. | 18 | 1 |
| 452 | 979.14 | wind | 1 | 10 | < th | dose independent | rect. | 4 | 2 |
| 493 | 980.25 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 13 |
| 540 | 980.89 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 575 | 981.81 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 7 |
| 579 | 982.04 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 19 |
| 662 | 984.21 | temperature | 25 | 90 | < th | dose independent | rect. | 4 | 1 |
| 777 | 985.76 | wind | 7 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 807 | 986.67 | wind | 1 | 10 | < th | dose independent | rect. | 4 | 5 |
| 812 | 986.82 | humidity | 90 | 720 | < th | dose independent | rect. | 21 | 2 |
| 816 | 986.98 | radiation | 1 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 828 | 987.05 | humidity | 50 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 838 | 987.31 | temperature | 30 | 720 | < th | dose independent | rect. | 18 | 9 |
| 868 | 987.43 | wind | 7 | 43200 | > th | dose dependent | rect. | 15 | 5 |
| 876 | 987.61 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 4 | 5 |
| 889 | 987.77 | radiation | 1 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 892 | 987.82 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 6 |
| 912 | 988.24 | radiation | 1 | 1440 | < th | dose independent | rect. | 18 | 10 |