Os10g0528400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutathione S-transferase, N-terminal domain containing protein.
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Os10g0528400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutathione S-transferase, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 284.02 | 0.792 | 8.22 | -1.03 | 3.17 | 2.75 | -0.995 | -1.84 | 0.263 | 0.00333 | 29.88 | 257 | 0.377 | 20.5 |
| 288.03 | 0.79 | 8.23 | -1.13 | 3.14 | 2.85 | -0.512 | -- | 0.253 | 24 | 29.67 | 250 | 0.317 | 20.7 |
| 287.27 | 0.789 | 8.23 | -1.06 | 3.1 | 2.72 | -- | -1.13 | 0.25 | 0.0062 | 29.63 | 248 | 0.383 | 20.7 |
| 288.87 | 0.792 | 8.23 | -1.23 | 3.1 | 2.75 | -- | -- | 0.231 | 24 | 29.5 | 255 | 0.267 | 20.7 |
| 517.51 | 1.07 | 8.06 | -0.531 | -- | 4.35 | -- | -1.12 | 0.703 | -- | 30.1 | 2 | 2.13 | 24 |
| 383.77 | 0.918 | 8.32 | -1.8 | 2.89 | -- | -0.0912 | -- | -0.213 | 0.97 | -- | -- | -- | -- |
| 383.8 | 0.917 | 8.32 | -1.79 | 2.89 | -- | -- | -- | -0.213 | 0.97 | -- | -- | -- | -- |
| 519.23 | 1.07 | 8.09 | -0.718 | -- | 4.34 | -- | -- | 0.652 | -- | 30.1 | 2 | 3.41 | 24 |
| 326.7 | 0.842 | 8.22 | -- | 3.09 | 3.12 | -- | -- | 0.306 | 23.8 | 29.8 | 259 | 0.233 | 21 |
| 902.78 | 1.4 | 8.27 | -1.69 | -- | -- | -- | -- | -0.157 | -- | -- | -- | -- | -- |
| 468.58 | 1.01 | 8.27 | -- | 2.86 | -- | -- | -- | -0.013 | 0.944 | -- | -- | -- | -- |
| 532.01 | 1.08 | 8.06 | -- | -- | 4.54 | -- | -- | 0.763 | -- | 30.1 | 2 | 3.41 | 24 |
| 977.73 | 1.46 | 8.23 | -- | -- | -- | -- | -- | 0.0296 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 284.88 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 3 | 286.31 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 19 |
| 15 | 291.67 | temperature | 30 | 10 | < th | dose dependent | sin | 22 | NA |
| 26 | 293.92 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 16 |
| 37 | 295.54 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 17 |
| 44 | 296.49 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 53 | 297.35 | temperature | 20 | 10 | > th | dose dependent | sin | 23 | NA |
| 56 | 297.80 | temperature | 20 | 90 | > th | dose dependent | sin | 0 | NA |
| 60 | 298.22 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 16 |
| 61 | 298.30 | temperature | 20 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 72 | 298.76 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 84 | 299.48 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 88 | 299.74 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 15 |
| 91 | 299.97 | temperature | 10 | 90 | > th | dose dependent | sin | 0 | NA |
| 96 | 300.17 | temperature | 10 | 10 | > th | dose dependent | sin | 23 | NA |
| 99 | 300.30 | temperature | 20 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 152 | 302.02 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 154 | 302.08 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 174 | 302.68 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 11 |
| 177 | 302.79 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 179 | 302.86 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 185 | 303.03 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 22 |
| 192 | 303.26 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 11 |
| 199 | 303.47 | temperature | 10 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 213 | 303.84 | temperature | 20 | 90 | > th | dose dependent | rect. | 2 | 23 |
| 216 | 303.87 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 20 |
| 283 | 305.43 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 386 | 307.58 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 388 | 307.61 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 409 | 307.92 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 421 | 308.18 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 435 | 308.47 | temperature | 25 | 90 | > th | dose independent | rect. | 9 | 10 |
| 462 | 309.01 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 479 | 309.30 | temperature | 25 | 270 | < th | dose independent | rect. | 3 | 16 |
| 486 | 309.60 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 10 |
| 503 | 309.89 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 12 |
| 558 | 310.75 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 638 | 312.23 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 662 | 312.84 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 10 |
| 677 | 313.06 | temperature | 25 | 270 | < th | dose independent | sin | 0 | NA |
| 709 | 313.57 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 716 | 313.70 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 717 | 313.72 | temperature | 25 | 270 | > th | dose independent | sin | 1 | NA |
| 814 | 315.08 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 818 | 315.11 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 10 |
| 964 | 317.11 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 977 | 317.22 | temperature | 20 | 4320 | > th | dose independent | rect. | 12 | 13 |
| 981 | 317.28 | temperature | 20 | 4320 | < th | dose independent | rect. | 12 | 13 |