Os10g0528300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Tau class GST protein 4.
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Os10g0528300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Tau class GST protein 4.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 277.36 | 0.782 | 6.08 | 2.67 | 0.77 | 2.37 | 0.254 | -4.32 | 0.211 | 7.09 | 29.52 | 3973 | -- | -- |
| 270.4 | 0.766 | 6.17 | 3.19 | 0.755 | 3.16 | -0.139 | -- | 0.297 | 7.95 | 23.33 | 22810 | -- | -- |
| 277.5 | 0.776 | 6.08 | 2.67 | 0.773 | 2.37 | -- | -4.28 | 0.211 | 7.2 | 29.4 | 3984 | -- | -- |
| 267.61 | 0.762 | 6.12 | 3.67 | 0.796 | 3.53 | -- | -- | 0.462 | 7.84 | 23.08 | 22756 | -- | -- |
| 305.55 | 0.814 | 6.09 | 2.73 | -- | 2.5 | -- | -4.64 | 0.251 | -- | 29.9 | 3658 | -- | -- |
| 421.13 | 0.962 | 6.37 | 0.474 | 0.791 | -- | -0.0713 | -- | -0.647 | 8.11 | -- | -- | -- | -- |
| 421.14 | 0.961 | 6.37 | 0.472 | 0.792 | -- | -- | -- | -0.647 | 8.08 | -- | -- | -- | -- |
| 298.82 | 0.805 | 6.12 | 3.66 | -- | 3.58 | -- | -- | 0.537 | -- | 23.42 | 22383 | -- | -- |
| 356.67 | 0.88 | 6.34 | -- | 0.883 | 1.83 | -- | -- | -0.477 | 7.5 | 40.14 | 4260 | -- | -- |
| 455.53 | 0.997 | 6.39 | 0.479 | -- | -- | -- | -- | -0.637 | -- | -- | -- | -- | -- |
| 427.01 | 0.967 | 6.38 | -- | 0.795 | -- | -- | -- | -0.699 | 8.04 | -- | -- | -- | -- |
| 361.89 | 0.886 | 6.33 | -- | -- | 2.42 | -- | -- | -0.395 | -- | 52.38 | 623 | -- | -- |
| 461.59 | 1 | 6.4 | -- | -- | -- | -- | -- | -0.69 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 264.15 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 2 | 264.17 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 3 | 265.21 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 8 | 267.12 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 10 | 267.26 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 26 | 267.37 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 30 | 268.06 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 31 | 268.13 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 40 | 269.15 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 44 | 269.40 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 48 | 269.61 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 49 | 269.61 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 53 | 269.73 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 60 | 269.88 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 62 | 269.93 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 65 | 270.06 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 70 | 270.19 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 71 | 270.19 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 84 | 270.61 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 87 | 270.72 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 90 | 270.81 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 8 | 12 |
| 91 | 270.82 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 95 | 270.88 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 129 | 271.27 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 10 |
| 148 | 271.43 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 21 | 9 |
| 177 | 271.57 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 196 | 271.63 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 217 | 271.70 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 240 | 271.77 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 2 | 18 |
| 241 | 271.78 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 260 | 271.83 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 8 | 12 |
| 262 | 271.83 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 7 | 15 |
| 266 | 271.84 | temperature | 20.0 | 43200 | < th | dose dependent | sin | 10 | NA |
| 281 | 271.86 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 2 | 12 |
| 298 | 271.88 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 2 | 10 |
| 305 | 271.89 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 8 | 16 |
| 326 | 271.91 | temperature | 25.0 | 43200 | < th | dose dependent | sin | 1 | NA |
| 354 | 271.94 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 8 | 16 |
| 398 | 271.99 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 403 | 272.00 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 422 | 272.02 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 5 | 5 |
| 463 | 272.05 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 16 | 22 |
| 465 | 272.05 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 7 | 23 |
| 468 | 272.06 | temperature | 25.0 | 43200 | < th | dose dependent | no | NA | NA |
| 473 | 272.06 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 7 | 21 |
| 476 | 272.06 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 5 | 23 |
| 477 | 272.06 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 13 | 23 |
| 496 | 272.07 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 11 | 23 |
| 581 | 272.14 | temperature | 20.0 | 43200 | < th | dose independent | sin | 19 | NA |
| 591 | 272.15 | temperature | 20.0 | 43200 | > th | dose independent | sin | 19 | NA |
| 842 | 272.40 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 843 | 272.40 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 870 | 272.45 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 878 | 272.46 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 891 | 272.49 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 910 | 272.52 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 941 | 272.56 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 3 | 3 |
| 961 | 272.60 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 21 |