Os10g0528200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glutathione S-transferase TSI-1 (EC 2.5.1.18) (Glutathione S- transferase 1).
FiT-DB / Search/ Help/ Sample detail
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Os10g0528200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glutathione S-transferase TSI-1 (EC 2.5.1.18) (Glutathione S- transferase 1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 142.88 | 0.562 | 11.3 | -2.55 | 1.75 | -1.82 | 1.78 | -4.45 | -0.248 | 9 | 1.05 | 15829 | -- | -- |
| 160.35 | 0.59 | 11.3 | -1.49 | 1.82 | -1.44 | 1.5 | -- | -0.104 | 9.31 | 1.422 | 23282 | -- | -- |
| 146.25 | 0.563 | 11.3 | -2.26 | 1.54 | -1.95 | -- | -4.28 | -0.218 | 8.93 | 0.8935 | 17052 | -- | -- |
| 160.88 | 0.591 | 11.1 | -1.1 | 1.47 | -1.86 | -- | -- | 0.283 | 9.09 | 1.236 | 22784 | -- | -- |
| 251.81 | 0.739 | 11.3 | -2.04 | -- | -1.73 | -- | -4.07 | -0.00385 | -- | 2.073 | 5243 | -- | -- |
| 213.68 | 0.685 | 11.3 | -1.98 | 1.77 | -- | 1.82 | -- | -0.435 | 9.2 | -- | -- | -- | -- |
| 225.41 | 0.703 | 11.3 | -1.91 | 1.77 | -- | -- | -- | -0.434 | 9.14 | -- | -- | -- | -- |
| 247.1 | 0.732 | 11.1 | -1.75 | -- | -2.27 | -- | -- | -0.0943 | -- | 2.15 | 5349 | -- | -- |
| 154.83 | 0.58 | 11 | -- | 1.75 | -2.1 | -- | -- | 0.515 | 9.05 | 1.019 | 47520 | -- | -- |
| 406.23 | 0.942 | 11.3 | -1.92 | -- | -- | -- | -- | -0.424 | -- | -- | -- | -- | -- |
| 321.9 | 0.839 | 11.2 | -- | 1.77 | -- | -- | -- | -0.221 | 9.23 | -- | -- | -- | -- |
| 292.46 | 0.797 | 11.1 | -- | -- | -3.26 | -- | -- | 0.332 | -- | 1.87 | 5363 | -- | -- |
| 503.32 | 1.05 | 11.3 | -- | -- | -- | -- | -- | -0.212 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 138.08 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 21 |
| 3 | 138.16 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 22 |
| 4 | 138.17 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 19 |
| 12 | 138.27 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 17 |
| 15 | 138.28 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 14 |
| 29 | 138.30 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 13 | 16 |
| 37 | 138.32 | radiation | 1.0 | 43200 | < th | dose dependent | sin | 18 | NA |
| 39 | 138.32 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 13 |
| 46 | 138.33 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 11 |
| 73 | 138.37 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 15 |
| 74 | 138.37 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 22 |
| 76 | 138.38 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 13 | 23 |
| 79 | 138.39 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 18 |
| 85 | 138.40 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 15 |
| 104 | 138.41 | radiation | 1.0 | 43200 | < th | dose dependent | no | NA | NA |
| 117 | 138.41 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 23 |
| 118 | 138.41 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 23 |
| 120 | 138.42 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 13 | 11 |
| 124 | 138.42 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 13 | 20 |
| 135 | 138.43 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 13 | 8 |
| 143 | 138.44 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 144 | 138.44 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 146 | 138.44 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 211 | 138.54 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 212 | 138.54 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 262 | 138.76 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 268 | 138.79 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 5 |
| 269 | 138.79 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 2 | 17 |
| 322 | 139.20 | humidity | 90.0 | 43200 | > th | dose dependent | sin | 2 | NA |
| 340 | 139.31 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 357 | 139.38 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 12 |
| 390 | 139.44 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 6 | 23 |
| 395 | 139.46 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 10 | 19 |
| 420 | 139.50 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 10 | 22 |
| 447 | 139.55 | humidity | 90.0 | 43200 | > th | dose dependent | no | NA | NA |
| 455 | 139.56 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 8 |
| 465 | 139.57 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 18 | 23 |
| 478 | 139.59 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 14 | 23 |
| 501 | 139.62 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 18 |
| 510 | 139.63 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 16 |
| 511 | 139.63 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 16 |
| 525 | 139.64 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 14 |
| 566 | 139.68 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 4 | 23 |
| 667 | 139.91 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 6 | 18 |
| 674 | 139.92 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 6 | 15 |
| 683 | 139.93 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 6 | 13 |
| 708 | 139.94 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 21 |
| 710 | 139.94 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 2 | 3 |
| 716 | 139.95 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 8 |
| 725 | 139.96 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 2 | 1 |
| 736 | 139.98 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 21 |
| 791 | 140.11 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 816 | 140.23 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 23 | 6 |
| 854 | 140.37 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 858 | 140.39 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 869 | 140.41 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 873 | 140.42 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 22 | 6 |
| 886 | 140.44 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 24 | 19 |
| 897 | 140.46 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 24 | 3 |
| 911 | 140.49 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 1 | 2 |
| 923 | 140.52 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 1 | 16 |
| 926 | 140.53 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 1 | 10 |
| 929 | 140.53 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 942 | 140.56 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 1 | 14 |
| 959 | 140.60 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 18 | 8 |
| 980 | 140.64 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 10 | 19 |
| 998 | 140.66 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 12 | 17 |