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Os10g0527800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Tau class GST protein 3.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.19 (0.057) R2 : 0.518
β1 : 3.77 (0.212) R2dD : 0.35 R2D : 0.152
β2 : -- (--) R2dC : -- R2C : --
β3 : 3.99 (0.244) R2dE : 0.309 R2E : 0.114
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.14 (0.124) R2dN8 : 0.126 R2N8 : -0.0398
σ : 1.06
deviance : 518.16
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C
peak time of C : --
E
wheather : temperature
threshold : 32.45
memory length : 48
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 11.6
open length of G : 23

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
504.05 1.05 8.14 4.1 0.241 4.25 1.83 -2.52 1.22 20.3 33.79 80 11.2 23.2
507.57 1.05 8.18 3.82 0.179 4.5 2.32 -- 1.2 18.1 34.93 68 11.3 23.2
510.81 1.05 8.16 3.95 0.332 3.78 -- -1.58 1.24 22.9 32.22 89 11.1 22.8
513.05 1.05 8.17 3.74 0.429 3.67 -- -- 1.21 23.2 31.32 91 11.1 23
516.46 1.06 8.13 3.99 -- 4.24 -- -1.78 1.21 -- 33.78 69 11.3 22.9
647.95 1.19 8.3 2.95 1.7 -- -0.346 -- 0.634 1.81 -- -- -- --
648.4 1.19 8.3 2.96 1.7 -- -- -- 0.636 1.78 -- -- -- --
518.16 1.06 8.19 3.77 -- 3.99 -- -- 1.14 -- 32.45 48 11.6 23
835.26 1.35 8.33 -- 0.989 2.14 -- -- 0.484 1.87 52.15 39 11.5 23.4
823.48 1.34 8.28 3.03 -- -- -- -- 0.674 -- -- -- -- --
879.2 1.39 8.37 -- 1.75 -- -- -- 0.306 1.82 -- -- -- --
854.64 1.37 8.3 -- -- 2.8 -- -- 0.601 -- 31.62 47 13.5 21.3
1065.43 1.52 8.36 -- -- -- -- -- 0.338 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 511.04 temperature 30 90 < th dose dependent rect. 11 23
3 515.79 temperature 15 270 > th dose dependent rect. 7 15
7 520.93 temperature 30 90 < th dose dependent rect. 23 23
8 521.26 temperature 20 30 > th dose dependent rect. 8 14
10 521.93 temperature 20 10 > th dose dependent rect. 8 23
14 522.75 temperature 20 10 > th dose dependent rect. 16 23
16 522.93 temperature 30 10 < th dose dependent rect. 13 23
17 522.99 temperature 30 10 < th dose dependent rect. 1 23
19 523.05 temperature 20 30 > th dose dependent rect. 4 23
20 523.22 temperature 30 30 < th dose dependent rect. 9 23
24 523.58 temperature 20 30 > th dose dependent no NA NA
25 523.59 temperature 20 30 > th dose dependent rect. 8 17
29 524.26 wind 7 43200 > th dose independent rect. 18 3
30 524.28 temperature 15 270 > th dose dependent rect. 13 23
31 524.30 temperature 10 270 > th dose dependent rect. 4 23
39 524.93 wind 7 43200 < th dose independent rect. 18 3
43 525.05 temperature 30 30 < th dose dependent rect. 17 23
45 525.24 wind 7 43200 > th dose dependent rect. 18 3
54 525.91 temperature 20 1440 > th dose dependent rect. 15 2
55 526.01 temperature 20 1440 > th dose dependent rect. 11 7
60 526.29 temperature 30 30 < th dose dependent no NA NA
65 526.44 temperature 20 1440 > th dose dependent rect. 13 5
71 526.56 temperature 30 30 < th dose dependent rect. 19 23
87 526.96 temperature 30 30 < th dose dependent rect. 15 23
98 527.33 temperature 20 1440 > th dose dependent rect. 13 1
124 528.19 wind 7 43200 > th dose independent rect. 20 1
140 528.71 temperature 20 1440 > th dose dependent rect. 11 3
143 528.74 temperature 20 10 > th dose dependent rect. 24 23
158 529.28 temperature 20 90 > th dose dependent rect. 23 23
159 529.31 temperature 10 720 > th dose dependent rect. 4 15
185 530.00 temperature 10 720 > th dose dependent rect. 24 19
196 530.20 temperature 30 1440 < th dose dependent rect. 11 7
217 530.74 temperature 20 10 > th dose dependent rect. 21 23
246 531.27 temperature 20 720 > th dose dependent rect. 23 20
250 531.31 temperature 10 1440 > th dose dependent rect. 11 3
276 531.74 temperature 30 1440 < th dose dependent rect. 15 3
278 531.77 temperature 10 720 > th dose dependent sin 0 NA
297 532.03 temperature 30 10 < th dose dependent rect. 23 23
303 532.15 temperature 30 90 < th dose dependent rect. 5 23
319 532.40 temperature 30 1440 < th dose dependent rect. 13 5
324 532.45 temperature 30 1440 < th dose dependent rect. 11 3
548 535.57 temperature 20 10 > th dose dependent rect. 4 19
593 535.98 temperature 30 30 < th dose dependent rect. 3 23
623 536.34 temperature 25 1440 < th dose independent rect. 7 11
692 537.02 temperature 30 1440 < th dose dependent rect. 13 1
707 537.08 temperature 25 1440 < th dose independent rect. 15 3
709 537.11 wind 9 43200 > th dose independent rect. 17 13
711 537.12 temperature 20 1440 > th dose dependent sin 21 NA
717 537.16 wind 9 43200 > th dose dependent rect. 18 12
766 537.60 humidity 50 14400 < th dose dependent rect. 16 19
800 537.84 temperature 25 1440 > th dose independent rect. 7 11
802 537.85 temperature 25 1440 < th dose independent rect. 11 9
831 538.03 temperature 25 1440 > th dose independent rect. 15 3
875 538.32 wind 9 43200 > th dose independent rect. 17 8
936 538.77 temperature 30 1440 < th dose dependent sin 21 NA
964 538.97 temperature 20 10 > th dose dependent rect. 8 12