Os10g0525600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Tau class GST protein 3.
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Os10g0525600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Tau class GST protein 3.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 458.55 | 1.01 | 6.79 | -0.546 | 2.05 | -2.9 | -0.871 | -1.1 | 0.746 | 15.4 | 10.42 | 11840 | 9.95 | 1 |
| 456.06 | 0.995 | 6.78 | -0.465 | 2.09 | -2.87 | -0.896 | -- | 0.732 | 15.4 | 10.4 | 11855 | 9.99 | 1.26 |
| 456.92 | 0.996 | 6.79 | -0.576 | 2.09 | -2.95 | -- | -0.978 | 0.714 | 15.4 | 10.4 | 11857 | 10 | 1.27 |
| 458.52 | 0.997 | 6.78 | -0.476 | 2.09 | -2.88 | -- | -- | 0.732 | 15.5 | 10.4 | 11862 | 9.99 | 1.26 |
| 656.27 | 1.19 | 6.78 | -0.63 | -- | -2.61 | -- | -0.871 | 0.689 | -- | 10 | 12999 | 10.1 | 1.25 |
| 610.14 | 1.16 | 6.91 | -1.68 | 1.89 | -- | -0.95 | -- | 0.125 | 15.7 | -- | -- | -- | -- |
| 612.84 | 1.16 | 6.91 | -1.7 | 1.88 | -- | -- | -- | 0.12 | 15.7 | -- | -- | -- | -- |
| 657.9 | 1.19 | 6.77 | -0.336 | -- | -2.58 | -- | -- | 0.777 | -- | 10.01 | 12999 | 10.1 | 1.27 |
| 463.39 | 1 | 6.78 | -- | 2.09 | -3.09 | -- | -- | 0.818 | 15.4 | 10.4 | 11862 | 9.99 | 1.27 |
| 809.3 | 1.33 | 6.91 | -1.77 | -- | -- | -- | -- | 0.0693 | -- | -- | -- | -- | -- |
| 688.68 | 1.23 | 6.87 | -- | 1.92 | -- | -- | -- | 0.308 | 15.7 | -- | -- | -- | -- |
| 660.43 | 1.2 | 6.77 | -- | -- | -2.64 | -- | -- | 0.804 | -- | 10.01 | 12999 | 10.1 | 1.25 |
| 892.39 | 1.39 | 6.86 | -- | -- | -- | -- | -- | 0.266 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 460.88 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 2 | 462.49 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 17 | 463.33 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 31 | 463.61 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 32 | 463.65 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 1 | 9 |
| 33 | 463.67 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 42 | 463.84 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 21 | 13 |
| 44 | 463.89 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 19 | 15 |
| 46 | 465.35 | wind | 1.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 47 | 465.78 | wind | 1.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 97 | 468.40 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 171 | 470.11 | temperature | 30.0 | 43200 | > th | dose dependent | sin | 8 | NA |
| 180 | 470.82 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 183 | 470.99 | temperature | 30.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 184 | 471.04 | temperature | 30.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 243 | 472.31 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 12 | 3 |
| 246 | 472.48 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 4 |
| 247 | 472.48 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 4 |
| 265 | 472.66 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 266 | 472.74 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 24 | 4 |
| 270 | 472.87 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 4 |
| 278 | 473.37 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 279 | 473.37 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 280 | 473.38 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 2 |
| 300 | 473.75 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 2 |
| 340 | 474.65 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 5 |
| 446 | 476.55 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 6 |
| 447 | 476.55 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 453 | 476.60 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 479 | 476.98 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 6 |
| 515 | 477.46 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 595 | 478.32 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 21 | 18 |
| 626 | 478.63 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 646 | 478.77 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 22 | 16 |
| 652 | 478.85 | temperature | 30.0 | 43200 | > th | dose dependent | no | NA | NA |
| 769 | 479.00 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 786 | 479.19 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 799 | 479.35 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 20 | 6 |
| 901 | 479.87 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 23 | 9 |
| 907 | 479.94 | wind | 1.0 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 910 | 479.98 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 20 | 6 |
| 933 | 480.17 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 953 | 480.29 | humidity | 70.0 | 43200 | < th | dose independent | sin | 4 | NA |
| 987 | 480.40 | humidity | 70.0 | 43200 | > th | dose independent | sin | 5 | NA |