Os10g0525400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glutathione S-transferase GSTU31 (Fragment).
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Os10g0525400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glutathione S-transferase GSTU31 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 191.34 | 0.65 | 11.2 | -4.46 | 0.777 | 2.05 | 0.629 | -4.49 | -0.357 | 6.81 | 24.82 | 1284 | -- | -- |
| 198.77 | 0.657 | 11.1 | -3.32 | 0.78 | 1.67 | 0.646 | -- | -0.106 | 6.86 | 24.18 | 1271 | -- | -- |
| 192.3 | 0.646 | 11.2 | -4.49 | 0.78 | 2.05 | -- | -4.62 | -0.351 | 6.89 | 24.96 | 1283 | -- | -- |
| 199.68 | 0.658 | 11.1 | -3.3 | 0.765 | 1.67 | -- | -- | -0.106 | 6.96 | 24.14 | 1258 | -- | -- |
| 223.33 | 0.696 | 11.2 | -4.35 | -- | 2.04 | -- | -3.94 | -0.363 | -- | 24.4 | 1309 | -- | -- |
| 290.94 | 0.8 | 11 | -2.76 | 0.86 | -- | 1.03 | -- | 0.149 | 5.62 | -- | -- | -- | -- |
| 293.47 | 0.802 | 11 | -2.76 | 0.868 | -- | -- | -- | 0.145 | 5.75 | -- | -- | -- | -- |
| 229.84 | 0.706 | 11.1 | -3.29 | -- | 1.67 | -- | -- | -0.109 | -- | 24 | 1306 | -- | -- |
| 454.47 | 0.993 | 10.9 | -- | 0.846 | 0.876 | -- | -- | 0.646 | 6.52 | 31.86 | 1171 | -- | -- |
| 332.51 | 0.852 | 11.1 | -2.73 | -- | -- | -- | -- | 0.166 | -- | -- | -- | -- | -- |
| 493.89 | 1.04 | 11 | -- | 0.825 | -- | -- | -- | 0.452 | 5.91 | -- | -- | -- | -- |
| 486.15 | 1.03 | 10.9 | -- | -- | 0.913 | -- | -- | 0.658 | -- | 31.9 | 1243 | -- | -- |
| 529.18 | 1.07 | 11 | -- | -- | -- | -- | -- | 0.469 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 191.98 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 2 | 192.23 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 9 |
| 4 | 192.30 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 18 |
| 17 | 192.59 | temperature | 25 | 1440 | > th | dose dependent | sin | 15 | NA |
| 104 | 194.48 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 15 |
| 148 | 195.85 | temperature | 25 | 1440 | > th | dose dependent | rect. | 5 | 20 |
| 172 | 196.01 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 197 | 196.21 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 283 | 197.74 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 5 |
| 295 | 197.91 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 313 | 198.43 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 315 | 198.47 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 321 | 198.60 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 340 | 199.08 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 350 | 199.29 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 7 |
| 351 | 199.29 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 15 |
| 360 | 199.43 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 12 |
| 369 | 199.55 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 15 |
| 370 | 199.56 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 386 | 199.84 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 20 |
| 391 | 199.88 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 19 |
| 410 | 200.03 | wind | 5 | 43200 | > th | dose dependent | rect. | 3 | 13 |
| 425 | 200.12 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 429 | 200.15 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 22 |
| 437 | 200.26 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 22 |
| 438 | 200.29 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 16 |
| 439 | 200.32 | wind | 7 | 43200 | < th | dose independent | sin | 2 | NA |
| 449 | 200.38 | wind | 7 | 43200 | < th | dose independent | rect. | 8 | 14 |
| 450 | 200.38 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 10 |
| 457 | 200.44 | wind | 7 | 43200 | > th | dose independent | rect. | 8 | 14 |
| 473 | 200.60 | wind | 7 | 43200 | > th | dose independent | sin | 1 | NA |
| 485 | 200.66 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 19 |
| 486 | 200.66 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 20 |
| 490 | 200.68 | wind | 7 | 43200 | < th | dose independent | rect. | 9 | 21 |
| 517 | 200.79 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 19 |
| 520 | 200.80 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 13 |
| 565 | 201.01 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 20 |
| 575 | 201.04 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 608 | 201.15 | temperature | 30 | 1440 | < th | dose independent | sin | 15 | NA |
| 674 | 201.45 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 20 |
| 676 | 201.47 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 703 | 201.59 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 16 |
| 710 | 201.61 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 740 | 201.70 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 18 |
| 761 | 201.79 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 787 | 201.85 | temperature | 30 | 1440 | > th | dose independent | sin | 14 | NA |
| 792 | 201.85 | wind | 5 | 43200 | > th | dose dependent | sin | 1 | NA |
| 797 | 201.86 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 811 | 201.89 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 11 |
| 816 | 201.90 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 9 |
| 821 | 201.91 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 6 |
| 825 | 201.91 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 840 | 201.95 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 863 | 202.02 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |
| 867 | 202.03 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 871 | 202.04 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 873 | 202.05 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 911 | 202.14 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |