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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0525200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.42 (0.0485) R2 : 0.000111
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.023 (0.102) R2dN8 : 0.000144 R2N8 : 0.000111
σ : 0.913
deviance : 382.68
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
369.12 0.903 3.49 0.05 0.149 0.212 0.369 2.67 -0.0421 5.93 1.128 1943 -- --
378.76 0.906 3.43 0.0984 0.2 0.42 -0.249 -- -0.0812 7.21 2.033 2166 -- --
369.43 0.895 3.49 0.0493 0.147 0.205 -- 2.63 -0.0434 6.34 1.115 1942 -- --
375.21 0.902 3.41 0.21 0.131 0.763 -- -- 0.0362 7.49 4.961 2534 -- --
370.55 0.897 3.48 0.0414 -- 0.154 -- 2.6 -0.0265 -- 1.109 1942 -- --
382 0.916 3.41 0.0395 0.1 -- -0.174 -- 0.0256 8.06 -- -- -- --
382.06 0.915 3.41 0.0337 0.105 -- -- -- 0.0252 7.26 -- -- -- --
375.85 0.903 3.41 0.22 -- 0.746 -- -- 0.0512 -- 5.1 2614 -- --
376.15 0.903 3.42 -- 0.126 0.654 -- -- 0.0196 7.84 5.2 2531 -- --
382.64 0.914 3.42 0.0356 -- -- -- -- 0.0269 -- -- -- -- --
382.09 0.914 3.41 -- 0.105 -- -- -- 0.0214 7.24 -- -- -- --
376.93 0.904 3.42 -- -- 0.646 -- -- 0.0282 -- 5.2 2617 -- --
382.68 0.913 3.42 -- -- -- -- -- 0.023 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 359.51 wind 1.0 720 > th dose independent rect. 8 19
6 363.17 wind 1.0 720 > th dose independent rect. 17 10
8 363.47 wind 1.0 720 < th dose dependent rect. 22 1
15 365.54 wind 1.0 720 < th dose independent rect. 22 1
16 365.57 humidity 80.0 4320 < th dose independent rect. 11 1
17 365.60 wind 9.0 1440 > th dose independent rect. 9 1
25 365.71 humidity 80.0 4320 > th dose independent rect. 11 1
30 366.15 wind 1.0 720 > th dose independent rect. 8 12
31 366.20 temperature 20.0 30 < th dose independent sin 0 NA
32 366.21 radiation 10.0 4320 < th dose dependent rect. 8 2
34 366.35 wind 7.0 4320 > th dose dependent rect. 21 5
35 366.36 wind 7.0 1440 > th dose dependent rect. 8 2
38 366.47 wind 1.0 1440 > th dose independent rect. 12 16
45 366.67 wind 1.0 1440 < th dose independent rect. 13 15
47 366.70 wind 1.0 1440 < th dose independent rect. 10 18
62 366.93 wind 7.0 4320 < th dose independent rect. 21 5
68 367.03 temperature 20.0 30 > th dose independent sin 0 NA
71 367.05 wind 1.0 720 > th dose dependent rect. 24 1
72 367.06 wind 1.0 720 > th dose independent rect. 15 13
74 367.09 wind 7.0 4320 > th dose dependent rect. 21 2
79 367.15 temperature 20.0 90 < th dose independent rect. 3 18
80 367.16 wind 1.0 720 > th dose independent rect. 24 20
82 367.20 wind 7.0 4320 > th dose independent rect. 1 1
87 367.20 wind 7.0 4320 > th dose dependent rect. 1 1
98 367.33 wind 5.0 720 < th dose independent rect. 20 5
101 367.37 humidity 80.0 4320 > th dose dependent rect. 10 1
107 367.42 wind 1.0 720 < th dose dependent rect. 13 11
123 367.67 wind 9.0 4320 > th dose independent rect. 19 1
124 367.67 wind 7.0 4320 > th dose independent rect. 21 5
126 367.67 wind 9.0 4320 > th dose dependent rect. 19 1
130 367.68 wind 9.0 720 < th dose dependent rect. 20 5
141 367.77 atmosphere 1015.0 90 < th dose dependent rect. 18 12
155 367.88 atmosphere 1015.0 10 < th dose dependent rect. 19 12
156 367.89 temperature 20.0 10 < th dose independent rect. 4 7
164 367.98 wind 1.0 720 < th dose dependent rect. 10 14
166 367.99 wind 1.0 720 > th dose independent rect. 23 5
175 368.03 temperature 20.0 10 < th dose independent rect. 4 15
189 368.10 wind 5.0 720 < th dose independent rect. 20 7
191 368.11 temperature 20.0 10 < th dose independent rect. 4 12
198 368.12 temperature 25.0 10 > th dose dependent rect. 7 1
202 368.15 wind 1.0 720 < th dose independent sin 18 NA
208 368.19 wind 3.0 10 < th dose dependent rect. 7 1
212 368.21 wind 7.0 4320 < th dose independent rect. 24 2
224 368.27 wind 1.0 1440 > th dose independent rect. 22 1
233 368.34 wind 7.0 1440 < th dose independent rect. 8 2
259 368.44 wind 1.0 720 > th dose independent sin 18 NA
265 368.46 wind 1.0 720 > th dose independent rect. 17 19
297 368.62 wind 1.0 1440 > th dose independent sin 16 NA
312 368.65 wind 9.0 720 < th dose dependent rect. 20 12
315 368.66 wind 5.0 720 < th dose independent rect. 20 12
324 368.67 wind 1.0 1440 < th dose dependent rect. 8 20
325 368.70 wind 7.0 1440 < th dose independent rect. 5 5
329 368.72 temperature 25.0 30 > th dose independent rect. 7 1
331 368.73 humidity 50.0 720 > th dose dependent rect. 5 3
345 368.79 wind 1.0 720 < th dose dependent sin 19 NA
386 368.89 atmosphere 1015.0 720 < th dose dependent rect. 19 1
416 368.97 wind 1.0 1440 < th dose dependent rect. 10 18
420 369.02 wind 1.0 1440 < th dose dependent rect. 12 16
452 369.14 atmosphere 1015.0 14400 > th dose dependent rect. 4 2
465 369.18 wind 1.0 14400 > th dose independent rect. 21 6
476 369.22 humidity 90.0 1440 < th dose independent rect. 8 1
484 369.24 wind 5.0 720 < th dose independent rect. 20 9
485 369.24 wind 1.0 720 < th dose independent rect. 10 14
555 369.53 wind 1.0 720 < th dose dependent rect. 19 5
564 369.57 precipitation 0.1 720 < th dose independent rect. 20 7
567 369.57 precipitation 0.1 720 < th dose dependent rect. 20 7
575 369.60 wind 1.0 1440 < th dose independent rect. 22 6
583 369.62 wind 5.0 270 > th dose dependent rect. 2 1
600 369.70 wind 1.0 14400 < th dose independent rect. 21 6
611 369.73 atmosphere 1005.0 1440 > th dose independent rect. 24 1
621 369.76 wind 9.0 4320 < th dose independent rect. 21 1
642 369.84 wind 1.0 1440 < th dose independent rect. 22 21
668 369.90 wind 1.0 720 > th dose independent rect. 13 7
699 369.97 precipitation 0.1 14400 > th dose independent rect. 22 1
703 369.97 precipitation 0.1 14400 > th dose dependent rect. 22 1
749 370.13 atmosphere 1005.0 1440 < th dose independent rect. 24 1
756 370.15 atmosphere 1005.0 90 < th dose independent rect. 1 5
761 370.15 wind 5.0 720 > th dose dependent rect. 20 7
762 370.16 precipitation 0.1 14400 < th dose independent rect. 22 1
764 370.16 atmosphere 1005.0 10 < th dose independent rect. 2 5
768 370.16 precipitation 0.1 14400 < th dose dependent rect. 22 1
771 370.17 atmosphere 1005.0 270 < th dose independent rect. 1 3
772 370.17 wind 1.0 720 > th dose independent rect. 13 23
775 370.18 atmosphere 1005.0 90 < th dose independent rect. 18 12
812 370.26 precipitation 0.1 4320 > th dose independent rect. 7 2
816 370.26 precipitation 0.1 4320 > th dose dependent rect. 7 2
823 370.27 radiation 1.0 90 < th dose dependent rect. 16 14
837 370.31 wind 3.0 10 < th dose independent rect. 7 1
853 370.34 wind 3.0 4320 > th dose dependent rect. 3 1
871 370.37 precipitation 0.1 720 > th dose independent rect. 24 1
872 370.37 wind 7.0 4320 < th dose independent rect. 4 2
876 370.37 precipitation 0.1 720 > th dose dependent rect. 24 1
883 370.39 wind 1.0 720 > th dose independent rect. 11 9
894 370.41 wind 1.0 14400 > th dose independent rect. 22 3
911 370.45 wind 1.0 720 < th dose independent rect. 13 11
974 370.56 wind 3.0 14400 < th dose dependent rect. 22 1
989 370.58 wind 1.0 1440 > th dose independent rect. 17 23