Os10g0525000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os10g0525000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.93 | 0.387 | 14 | -0.986 | 0.877 | -0.491 | -0.19 | -2.12 | -0.141 | 11.4 | 68.29 | 5065 | -- | -- |
| 71.69 | 0.394 | 14 | -0.775 | 0.902 | -0.864 | -0.186 | -- | -0.177 | 11.3 | 54.07 | 4422 | -- | -- |
| 68.09 | 0.384 | 14 | -0.997 | 0.876 | -0.489 | -- | -2.12 | -0.144 | 11.4 | 68.44 | 5064 | -- | -- |
| 71.65 | 0.394 | 14 | -0.801 | 0.882 | -0.85 | -- | -- | -0.191 | 11.2 | 54.05 | 4422 | -- | -- |
| 113.9 | 0.497 | 14 | -1.18 | -- | -0.953 | -- | -2.23 | -0.0622 | -- | 78.71 | 5227 | -- | -- |
| 84.24 | 0.43 | 14 | -1.09 | 0.92 | -- | -0.0089 | -- | -0.0925 | 11.2 | -- | -- | -- | -- |
| 84.24 | 0.43 | 14 | -1.09 | 0.92 | -- | -- | -- | -0.0925 | 11.2 | -- | -- | -- | -- |
| 98.44 | 0.462 | 14 | -1.04 | -- | -1.31 | -- | -- | -0.0834 | -- | 93 | 911 | -- | -- |
| 86.58 | 0.433 | 14 | -- | 0.882 | -1.14 | -- | -- | -0.122 | 10.9 | 53 | 4376 | -- | -- |
| 137.21 | 0.547 | 14 | -1.12 | -- | -- | -- | -- | -0.101 | -- | -- | -- | -- | -- |
| 115.7 | 0.503 | 14 | -- | 0.931 | -- | -- | -- | 0.0292 | 11.3 | -- | -- | -- | -- |
| 125.76 | 0.522 | 14 | -- | -- | -1.33 | -- | -- | -0.0156 | -- | 87.12 | 937 | -- | -- |
| 170.02 | 0.609 | 14 | -- | -- | -- | -- | -- | 0.0228 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.31 | wind | 1 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 2 | 61.47 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 5 |
| 3 | 61.71 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 4 | 61.78 | wind | 1 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 5 | 61.88 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 6 | 62.02 | wind | 1 | 14400 | > th | dose independent | rect. | 3 | 10 |
| 7 | 62.02 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 3 |
| 8 | 62.08 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 9 | 62.09 | radiation | 30 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 11 | 62.14 | wind | 1 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 16 | 62.18 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 19 | 62.29 | wind | 1 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 23 | 62.36 | wind | 3 | 14400 | < th | dose dependent | rect. | 3 | 7 |
| 24 | 62.37 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 10 |
| 25 | 62.39 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 27 | 62.42 | radiation | 30 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 43 | 62.52 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 10 |
| 55 | 62.65 | wind | 3 | 14400 | < th | dose dependent | rect. | 24 | 10 |
| 72 | 62.81 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 76 | 62.82 | wind | 5 | 14400 | < th | dose dependent | rect. | 24 | 14 |
| 79 | 62.86 | wind | 1 | 14400 | > th | dose independent | sin | 4 | NA |
| 81 | 62.87 | wind | 7 | 14400 | < th | dose dependent | sin | 6 | NA |
| 105 | 62.97 | wind | 5 | 14400 | < th | dose dependent | rect. | 3 | 10 |
| 106 | 62.98 | wind | 3 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 109 | 62.98 | wind | 1 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 123 | 63.02 | wind | 1 | 14400 | > th | dose dependent | rect. | 17 | 15 |
| 142 | 63.10 | wind | 3 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 148 | 63.13 | wind | 9 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 149 | 63.14 | wind | 1 | 14400 | < th | dose independent | sin | 4 | NA |
| 165 | 63.18 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 12 |
| 166 | 63.18 | wind | 9 | 14400 | < th | dose dependent | sin | 10 | NA |
| 174 | 63.19 | wind | 1 | 14400 | > th | dose dependent | sin | 6 | NA |
| 201 | 63.24 | wind | 9 | 14400 | < th | dose dependent | rect. | 20 | 18 |
| 205 | 63.26 | wind | 1 | 14400 | > th | dose dependent | sin | 10 | NA |
| 279 | 63.39 | wind | 3 | 14400 | < th | dose independent | rect. | 20 | 10 |
| 332 | 63.46 | wind | 3 | 14400 | > th | dose independent | rect. | 20 | 10 |
| 338 | 63.46 | wind | 9 | 14400 | > th | dose dependent | rect. | 17 | 20 |
| 349 | 63.48 | wind | 1 | 14400 | > th | dose dependent | rect. | 20 | 18 |
| 384 | 63.52 | wind | 3 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 405 | 63.56 | wind | 1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 514 | 63.62 | wind | 1 | 14400 | > th | dose dependent | rect. | 24 | 15 |
| 524 | 63.64 | wind | 7 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 547 | 63.65 | wind | 3 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 656 | 63.71 | radiation | 40 | 43200 | > th | dose independent | sin | 5 | NA |
| 744 | 63.75 | wind | 3 | 14400 | < th | dose independent | rect. | 20 | 12 |
| 886 | 63.81 | radiation | 40 | 43200 | < th | dose dependent | rect. | 10 | 3 |