Os10g0524600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Proteinase inhibitor, propeptide domain containing protein.
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Os10g0524600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Proteinase inhibitor, propeptide domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 583.04 | 1.13 | 5.32 | -3.7 | 1.64 | 3.55 | -3.23 | -3.55 | -0.45 | 14.7 | 24.02 | 1467 | -- | -- |
| 591.82 | 1.13 | 5.26 | -2.91 | 1.49 | 3.3 | -2.96 | -- | -0.365 | 14.6 | 23.07 | 1519 | -- | -- |
| 617.48 | 1.16 | 5.31 | -3.61 | 1.74 | 3.56 | -- | -2.87 | -0.454 | 14.9 | 23.78 | 1417 | -- | -- |
| 620.98 | 1.16 | 5.22 | -2.8 | 1.76 | 3.31 | -- | -- | -0.278 | 14.9 | 23.56 | 1412 | -- | -- |
| 737.65 | 1.26 | 5.32 | -3.54 | -- | 3.72 | -- | -2.94 | -0.456 | -- | 23.59 | 1715 | -- | -- |
| 992.74 | 1.48 | 5.06 | -1.5 | 1.42 | -- | -3.59 | -- | 0.388 | 14.8 | -- | -- | -- | -- |
| 1036.97 | 1.51 | 5.08 | -1.58 | 1.42 | -- | -- | -- | 0.368 | 15 | -- | -- | -- | -- |
| 744.54 | 1.27 | 5.23 | -2.75 | -- | 3.41 | -- | -- | -0.304 | -- | 23.21 | 1720 | -- | -- |
| 801.82 | 1.32 | 5.09 | -- | 1.78 | 2.64 | -- | -- | 0.3 | 14.9 | 24.84 | 1379 | -- | -- |
| 1152.04 | 1.59 | 5.08 | -1.64 | -- | -- | -- | -- | 0.331 | -- | -- | -- | -- | -- |
| 1103.12 | 1.55 | 5.04 | -- | 1.45 | -- | -- | -- | 0.544 | 15 | -- | -- | -- | -- |
| 932.02 | 1.42 | 5.08 | -- | -- | 2.84 | -- | -- | 0.33 | -- | 25.32 | 1740 | -- | -- |
| 1223.38 | 1.63 | 5.04 | -- | -- | -- | -- | -- | 0.514 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 587.75 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 4 | 588.75 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 23 |
| 8 | 589.20 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 22 |
| 11 | 589.45 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 23 |
| 16 | 589.68 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 17 | 589.70 | temperature | 25 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 45 | 590.13 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 20 |
| 46 | 590.13 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 59 | 590.38 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 18 |
| 104 | 591.03 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 193 | 593.47 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 236 | 596.05 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 244 | 596.47 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 12 |
| 410 | 602.25 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 465 | 604.29 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 481 | 605.03 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 542 | 607.78 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 3 |
| 564 | 608.59 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 607 | 610.39 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 632 | 611.19 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 644 | 611.48 | temperature | 25 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 651 | 611.68 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 15 |
| 652 | 611.68 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 17 |
| 659 | 611.75 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 9 |
| 666 | 611.79 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 682 | 612.02 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 710 | 612.27 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 726 | 612.82 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 762 | 613.60 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 5 |
| 789 | 613.94 | wind | 5 | 43200 | > th | dose dependent | rect. | 3 | 12 |
| 809 | 614.43 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 912 | 615.55 | temperature | 25 | 14400 | > th | dose dependent | rect. | 16 | 14 |
| 965 | 616.11 | temperature | 30 | 14400 | < th | dose independent | sin | 14 | NA |
| 979 | 616.39 | temperature | 30 | 14400 | > th | dose independent | sin | 14 | NA |