Os10g0524000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0524000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 245.41 | 0.736 | -7880 | 48200 | 0.0509 | -1500000 | -0.0895 | 9170000 | -0.199 | 17.1 | 1 | 4 | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 257.91 | 0.753 | 2.98 | 0.0158 | 0.111 | -- | 0.184 | -- | -0.221 | 17.6 | -- | -- | -- | -- |
| 258 | 0.752 | 2.98 | 0.0148 | 0.113 | -- | -- | -- | -0.22 | 17.7 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 258.65 | 0.751 | 2.97 | 0.0113 | -- | -- | -- | -- | -0.223 | -- | -- | -- | -- | -- |
| 258 | 0.751 | 2.98 | -- | 0.112 | -- | -- | -- | -0.222 | 17.7 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 258.66 | 0.751 | 2.97 | -- | -- | -- | -- | -- | -0.224 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 234.52 | temperature | 30 | 10 | > th | dose independent | rect. | 16 | 2 |
| 5 | 235.92 | temperature | 30 | 90 | > th | dose dependent | rect. | 16 | 2 |
| 98 | 237.36 | temperature | 30 | 90 | > th | dose dependent | rect. | 16 | 19 |
| 100 | 237.99 | radiation | 10 | 90 | > th | dose dependent | rect. | 17 | 1 |
| 114 | 238.17 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 16 | 3 |
| 115 | 238.49 | atmosphere | 995 | 90 | > th | dose independent | sin | 9 | NA |
| 118 | 238.75 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 17 | 1 |
| 207 | 238.86 | atmosphere | 995 | 10 | > th | dose independent | sin | 8 | NA |
| 210 | 238.88 | atmosphere | 995 | 10 | < th | dose independent | sin | 8 | NA |
| 407 | 238.93 | atmosphere | 995 | 90 | < th | dose independent | sin | 9 | NA |
| 413 | 238.97 | radiation | 10 | 90 | > th | dose independent | rect. | 17 | 1 |
| 426 | 238.98 | atmosphere | 995 | 30 | < th | dose dependent | sin | 8 | NA |
| 538 | 239.62 | wind | 5 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 581 | 240.18 | humidity | 70 | 30 | < th | dose independent | rect. | 18 | 1 |
| 582 | 240.18 | temperature | 30 | 270 | > th | dose independent | rect. | 16 | 2 |
| 607 | 240.97 | temperature | 30 | 270 | > th | dose dependent | sin | 11 | NA |
| 622 | 241.65 | temperature | 30 | 10 | > th | dose independent | sin | 12 | NA |
| 635 | 242.19 | temperature | 30 | 270 | > th | dose independent | rect. | 16 | 17 |
| 653 | 242.26 | wind | 5 | 10 | > th | dose independent | rect. | 17 | 2 |
| 689 | 242.46 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 13 | 5 |
| 697 | 242.61 | temperature | 30 | 270 | > th | dose independent | rect. | 16 | 19 |
| 754 | 243.00 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 11 | 9 |
| 758 | 243.10 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 11 | 7 |
| 759 | 243.11 | temperature | 30 | 720 | < th | dose independent | sin | 9 | NA |
| 768 | 243.23 | temperature | 30 | 720 | > th | dose independent | sin | 9 | NA |
| 792 | 243.58 | wind | 7 | 90 | > th | dose dependent | rect. | 16 | 1 |
| 794 | 243.60 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 10 | 10 |
| 795 | 243.61 | temperature | 30 | 10 | < th | dose independent | sin | 12 | NA |
| 798 | 243.62 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 14 | 6 |
| 799 | 243.63 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 9 | 11 |
| 818 | 243.79 | atmosphere | 995 | 90 | > th | dose independent | rect. | 3 | 23 |
| 824 | 243.87 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 8 | 12 |
| 827 | 243.90 | temperature | 30 | 270 | < th | dose independent | rect. | 10 | 12 |
| 834 | 243.92 | atmosphere | 1000 | 30 | > th | dose dependent | rect. | 11 | 11 |
| 859 | 244.00 | temperature | 30 | 720 | > th | dose independent | rect. | 9 | 2 |
| 866 | 244.01 | atmosphere | 1005 | 30 | < th | dose independent | rect. | 14 | 6 |
| 950 | 244.18 | temperature | 10 | 270 | > th | dose dependent | rect. | 13 | 14 |
| 997 | 244.34 | temperature | 30 | 270 | > th | dose dependent | rect. | 13 | 5 |