Os10g0523000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os10g0523000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 154.66 | 0.579 | 3.08 | 0.223 | 0.0882 | 4.8 | -0.594 | -13.1 | 0.0522 | 8.3 | 18.08 | 77 | 2.15 | 1.13 |
| 154.83 | 0.58 | 3.09 | 0.271 | 0.0543 | 10.8 | -0.534 | -- | 0.0515 | 10.1 | 18.45 | 97 | 2.37 | 0.396 |
| 155.71 | 0.581 | 3.08 | 0.205 | 0.0958 | 4.88 | -- | -13 | 0.0519 | 7.16 | 18.13 | 79 | 2.15 | 1.14 |
| 155.63 | 0.581 | 3.09 | 0.231 | 0.0994 | 10.8 | -- | -- | 0.0499 | 7.36 | 18.51 | 103 | 2.4 | 0.717 |
| 156.19 | 0.582 | 3.08 | 0.208 | -- | 5.07 | -- | -12.7 | 0.0537 | -- | 18.19 | 80 | 2.19 | 1.15 |
| 266.58 | 0.765 | 3.11 | 0.044 | 0.189 | -- | -1.31 | -- | -0.00776 | 5.98 | -- | -- | -- | -- |
| 270.76 | 0.771 | 3.1 | 0.0321 | 0.183 | -- | -- | -- | -0.00306 | 5.57 | -- | -- | -- | -- |
| 156.09 | 0.582 | 3.1 | 0.233 | -- | 10.8 | -- | -- | 0.0543 | -- | 18.51 | 103 | 2.43 | 0.242 |
| 157.02 | 0.584 | 3.1 | -- | 0.097 | 10.7 | -- | -- | 0.0265 | 7.04 | 18.51 | 102 | 2.41 | 0.333 |
| 272.5 | 0.771 | 3.11 | 0.0381 | -- | -- | -- | -- | 0.00136 | -- | -- | -- | -- | -- |
| 270.79 | 0.77 | 3.11 | -- | 0.183 | -- | -- | -- | -0.00664 | 5.57 | -- | -- | -- | -- |
| 157.51 | 0.585 | 3.1 | -- | -- | 10.7 | -- | -- | 0.0283 | -- | 18.51 | 103 | 2.43 | 0.195 |
| 272.54 | 0.771 | 3.11 | -- | -- | -- | -- | -- | -0.00287 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 183.02 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 4 | 213.56 | temperature | 20.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 15 | 216.44 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 44 | 225.94 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 46 | 226.04 | temperature | 20.0 | 720 | < th | dose independent | rect. | 16 | 1 |
| 50 | 229.09 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 16 | 1 |
| 75 | 233.51 | humidity | 90.0 | 90 | > th | dose independent | rect. | 2 | 2 |
| 88 | 235.40 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 3 | 6 |
| 96 | 235.63 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 2 |
| 97 | 235.63 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 2 |
| 130 | 240.03 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 3 | 1 |
| 154 | 241.92 | wind | 1.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 173 | 242.87 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 194 | 243.82 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 209 | 244.30 | humidity | 90.0 | 270 | > th | dose independent | rect. | 24 | 1 |
| 233 | 244.91 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 309 | 247.17 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 313 | 247.30 | wind | 5.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 344 | 248.01 | humidity | 90.0 | 720 | > th | dose independent | rect. | 16 | 5 |
| 345 | 248.01 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 24 | 1 |
| 363 | 248.32 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 17 | 3 |
| 384 | 248.83 | wind | 1.0 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 387 | 248.95 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 23 |
| 388 | 248.95 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 23 |
| 389 | 248.97 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 16 | 5 |
| 392 | 249.04 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 1 |
| 394 | 249.04 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 424 | 249.62 | humidity | 90.0 | 10 | > th | dose independent | rect. | 3 | 7 |
| 429 | 249.68 | humidity | 90.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 432 | 249.69 | humidity | 90.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 449 | 249.95 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 451 | 249.96 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 453 | 249.96 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 454 | 249.96 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 460 | 249.96 | radiation | 1.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 465 | 249.96 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 23 |
| 466 | 249.96 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 471 | 249.97 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 3 | 5 |
| 476 | 250.03 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 23 |
| 507 | 250.14 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 23 |
| 514 | 250.24 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 3 | 7 |
| 570 | 250.65 | wind | 9.0 | 30 | < th | dose independent | rect. | 4 | 23 |
| 573 | 250.71 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 4 | 4 |
| 594 | 250.95 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 595 | 250.95 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 598 | 250.95 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 602 | 250.95 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 611 | 250.95 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 612 | 250.95 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 613 | 250.95 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 628 | 250.95 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 719 | 251.66 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 4 | 8 |
| 825 | 252.27 | wind | 9.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 896 | 252.88 | humidity | 90.0 | 720 | < th | dose independent | rect. | 15 | 6 |
| 905 | 252.94 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 2 | 15 |
| 927 | 253.10 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 23 |
| 941 | 253.20 | humidity | 90.0 | 720 | < th | dose independent | rect. | 17 | 4 |