Os10g0522800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0522800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 360.89 | 0.893 | 6.16 | -3.82 | 2.61 | 2.54 | -0.332 | -0.774 | 0.256 | 18.6 | 21.49 | 1383 | -- | -- |
| 362.15 | 0.886 | 6.14 | -3.64 | 2.61 | 2.59 | -0.305 | -- | 0.3 | 18.6 | 21.42 | 1387 | -- | -- |
| 360.68 | 0.885 | 6.17 | -3.85 | 2.6 | 2.5 | -- | -0.901 | 0.235 | 18.6 | 21.51 | 1392 | -- | -- |
| 362.4 | 0.887 | 6.14 | -3.62 | 2.61 | 2.59 | -- | -- | 0.301 | 18.6 | 21.5 | 1387 | -- | -- |
| 640.41 | 1.18 | 6.12 | -3.89 | -- | 2.46 | -- | -1.4 | 0.187 | -- | 21.46 | 628 | -- | -- |
| 557.43 | 1.11 | 5.97 | -2.56 | 2.57 | -- | -0.236 | -- | 1.04 | 18.8 | -- | -- | -- | -- |
| 557.57 | 1.11 | 5.97 | -2.55 | 2.57 | -- | -- | -- | 1.04 | 18.8 | -- | -- | -- | -- |
| 646.84 | 1.18 | 6.08 | -3.53 | -- | 2.55 | -- | -- | 0.264 | -- | 21.5 | 645 | -- | -- |
| 644.74 | 1.18 | 6.01 | -- | 2.58 | 1.59 | -- | -- | 0.756 | 18.4 | 22.12 | 887 | -- | -- |
| 902.76 | 1.4 | 5.92 | -2.61 | -- | -- | -- | -- | 0.987 | -- | -- | -- | -- | -- |
| 729.26 | 1.26 | 5.91 | -- | 2.6 | -- | -- | -- | 1.32 | 18.7 | -- | -- | -- | -- |
| 937.44 | 1.43 | 5.96 | -- | -- | 1.7 | -- | -- | 0.791 | -- | 22 | 606 | -- | -- |
| 1082.48 | 1.54 | 5.85 | -- | -- | -- | -- | -- | 1.28 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 359.39 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 2 | 369.64 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 22 |
| 3 | 370.10 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 15 | 21 |
| 6 | 370.89 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 25 | 372.64 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 21 | 22 |
| 46 | 374.36 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 60 | 375.92 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 69 | 376.62 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 72 | 377.09 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 73 | 377.15 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 10 | 23 |
| 97 | 379.25 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 10 | 19 |
| 102 | 379.50 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 13 |
| 131 | 380.37 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 15 | NA |
| 164 | 381.14 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 182 | 381.42 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 185 | 381.46 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 210 | 382.09 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 20 |
| 249 | 382.60 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 369 | 384.54 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 372 | 384.60 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 373 | 384.64 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 379 | 384.74 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 17 | 19 |
| 410 | 385.23 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 16 |
| 411 | 385.25 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 436 | 385.64 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 477 | 386.22 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 480 | 386.29 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 10 | 21 |
| 490 | 386.41 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 494 | 386.46 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 508 | 386.69 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 510 | 386.69 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 522 | 386.78 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 16 |
| 539 | 387.03 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 3 |
| 547 | 387.12 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 590 | 387.57 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 591 | 387.57 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 618 | 387.90 | temperature | 20.0 | 1440 | > th | dose independent | sin | 7 | NA |
| 622 | 387.94 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 628 | 387.97 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 654 | 388.24 | temperature | 25.0 | 720 | < th | dose dependent | sin | 1 | NA |
| 662 | 388.31 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 697 | 388.62 | temperature | 20.0 | 1440 | < th | dose independent | sin | 7 | NA |
| 716 | 388.78 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 2 | 10 |
| 730 | 388.94 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 2 | 10 |
| 739 | 389.01 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 750 | 389.06 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 758 | 389.12 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 776 | 389.22 | temperature | 20.0 | 1440 | > th | dose independent | no | NA | NA |
| 793 | 389.40 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 807 | 389.51 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 817 | 389.60 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 849 | 389.94 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 862 | 390.06 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 888 | 390.24 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 910 | 390.45 | temperature | 15.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 914 | 390.47 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 23 | 4 |
| 916 | 390.48 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 967 | 390.93 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 976 | 391.02 | temperature | 20.0 | 1440 | < th | dose independent | no | NA | NA |