Os10g0522700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0522700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 462.45 | 1.01 | 6.11 | -5.06 | 3.74 | 3.4 | -2.64 | 1.35 | -0.633 | 18 | 1009 | 16 | 11.8 | -- |
| 462.89 | 1 | 6.1 | -5.06 | 3.73 | 3.54 | -2.39 | -- | -0.604 | 18 | 1009 | 14 | 11.7 | -- |
| 473.04 | 1.01 | 6.11 | -5.08 | 3.66 | 3.74 | -- | -2.83 | -0.601 | 18 | 1009 | 7 | 11.4 | -- |
| 476 | 1.02 | 6.12 | -5.05 | 3.75 | 3.36 | -- | -- | -0.642 | 18.1 | 1009 | 17 | 11.7 | -- |
| 469.11 | 1.01 | 6.04 | -5.07 | -- | 6.96 | -- | -2.84 | -0.692 | -- | 1027 | 4 | 11.9 | -- |
| 541.56 | 1.09 | 6.21 | -4.93 | 4.62 | -- | -1.74 | -- | -0.959 | 18 | -- | -- | -- | -- |
| 548.98 | 1.1 | 6.21 | -4.92 | 4.61 | -- | -- | -- | -0.965 | 18.1 | -- | -- | -- | -- |
| 478.77 | 1.02 | 6.05 | -5.07 | -- | 6.86 | -- | -- | -0.701 | -- | 1027 | 4 | 11.9 | -- |
| 1143.48 | 1.57 | 6.01 | -- | 4.03 | 2.65 | -- | -- | -0.146 | 17.9 | 1009 | 56 | 11.8 | -- |
| 1650.4 | 1.9 | 6.13 | -5.05 | -- | -- | -- | -- | -1.07 | -- | -- | -- | -- | -- |
| 1186.74 | 1.61 | 6.09 | -- | 4.68 | -- | -- | -- | -0.418 | 18 | -- | -- | -- | -- |
| 1149.55 | 1.58 | 5.94 | -- | -- | 6.31 | -- | -- | -0.215 | -- | 1036 | 3 | 12 | -- |
| 2323.63 | 2.25 | 6 | -- | -- | -- | -- | -- | -0.509 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 460.42 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 13 |
| 2 | 461.55 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 9 | 14 |
| 6 | 462.46 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 7 | 14 |
| 8 | 463.51 | atmosphere | 1010 | 10 | < th | dose dependent | sin | 18 | NA |
| 14 | 465.72 | atmosphere | 995 | 10 | > th | dose dependent | sin | 18 | NA |
| 33 | 468.47 | atmosphere | 1000 | 30 | > th | dose independent | sin | 19 | NA |
| 36 | 468.86 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 8 | 13 |
| 37 | 468.89 | atmosphere | 1000 | 30 | < th | dose independent | sin | 19 | NA |
| 38 | 468.89 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 12 |
| 39 | 468.92 | temperature | 15 | 90 | > th | dose dependent | rect. | 13 | 14 |
| 47 | 469.18 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 12 | 12 |
| 48 | 469.24 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 7 |
| 70 | 471.00 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 10 | 14 |
| 72 | 471.11 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 12 | 15 |
| 74 | 471.24 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 10 | 13 |
| 75 | 471.26 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 21 | 23 |
| 77 | 471.38 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 13 | 14 |
| 95 | 472.07 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 9 | 14 |
| 114 | 473.12 | temperature | 30 | 270 | < th | dose dependent | sin | 20 | NA |
| 116 | 473.20 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 16 | 5 |
| 131 | 473.57 | temperature | 30 | 720 | > th | dose independent | rect. | 8 | 5 |
| 145 | 473.62 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 8 | 16 |
| 177 | 474.36 | temperature | 20 | 10 | > th | dose dependent | rect. | 14 | 13 |
| 184 | 474.55 | temperature | 30 | 720 | > th | dose dependent | rect. | 8 | 5 |
| 198 | 474.58 | atmosphere | 1000 | 270 | > th | dose dependent | rect. | 16 | 5 |
| 243 | 475.79 | temperature | 30 | 720 | > th | dose independent | rect. | 10 | 1 |
| 281 | 476.48 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 10 | 14 |
| 325 | 476.81 | temperature | 10 | 90 | > th | dose dependent | sin | 18 | NA |
| 367 | 477.31 | temperature | 10 | 270 | > th | dose dependent | sin | 20 | NA |
| 369 | 477.33 | temperature | 30 | 720 | > th | dose dependent | sin | 7 | NA |
| 420 | 478.24 | temperature | 30 | 720 | > th | dose independent | sin | 8 | NA |
| 467 | 478.99 | atmosphere | 995 | 720 | > th | dose dependent | rect. | 9 | 5 |
| 491 | 479.38 | temperature | 20 | 10 | > th | dose dependent | rect. | 14 | 10 |
| 533 | 480.12 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 17 | 21 |
| 573 | 480.63 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 3 | 23 |
| 687 | 481.81 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 17 | 23 |
| 735 | 482.51 | temperature | 20 | 720 | > th | dose dependent | rect. | 10 | 6 |
| 798 | 483.24 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 14 | 23 |
| 867 | 483.92 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 1 |
| 875 | 484.05 | atmosphere | 995 | 720 | > th | dose dependent | rect. | 9 | 9 |
| 924 | 484.43 | temperature | 15 | 720 | > th | dose dependent | rect. | 8 | 8 |
| 938 | 484.54 | atmosphere | 1010 | 720 | < th | dose dependent | rect. | 11 | 4 |
| 981 | 484.72 | humidity | 90 | 14400 | < th | dose dependent | rect. | 21 | 9 |