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Os10g0521700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Shaggy-related protein kinase NtK-1 (EC 2.7.1.-).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.2 (0.0144) R2 : 0.865
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.03 (0.0375) R2dC : 0.868 R2C : 0.865
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.000963 (0.0302) R2dN8 : 3.87e-07 R2N8 : -0.00237
σ : 0.271
deviance : 33.55
__
_____
C
peak time of C : 5.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
19.72 0.209 12.2 -0.609 1.93 0.373 0.347 -0.3 -0.0387 6 0.12 99 -- --
20.25 0.21 12.2 -0.612 1.92 0.366 0.332 -- -0.0394 5.99 0.11 103 -- --
20.02 0.208 12.2 -0.61 1.93 0.376 -- -0.301 -0.0382 6.01 0.12 99 -- --
20.49 0.211 12.2 -0.607 1.92 0.372 -- -- -0.0426 5.98 0.1 107 -- --
39.17 0.291 12.1 -0.684 -- 2.17 -- -0.00343 -0.0645 -- 1.56 651 -- --
22.44 0.222 12.2 -0.643 2.04 -- 0.284 -- -0.0693 5.2 -- -- -- --
22.65 0.223 12.2 -0.643 2.04 -- -- -- -0.0707 5.19 -- -- -- --
26.94 0.242 12.2 -0.519 -- 2.26 -- -- 0.0255 -- 1.36 647 -- --
30.41 0.257 12.2 -- 1.9 0.352 -- -- 0.0122 5.96 7.671e-05 137 -- --
240.33 0.724 12.2 -0.572 -- -- -- -- -0.0193 -- -- -- -- --
33.55 0.271 12.2 -- 2.03 -- -- -- 0.000963 5.2 -- -- -- --
32.83 0.267 12.2 -- -- 2.28 -- -- 0.0822 -- 0.5421 651 -- --
248.94 0.736 12.2 -- -- -- -- -- 0.0441 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 16.45 atmosphere 1015.0 270 < th dose independent rect. 8 13
2 16.52 radiation 40.0 270 < th dose independent rect. 21 11
3 16.54 temperature 10.0 270 > th dose independent rect. 21 11
4 16.54 temperature 30.0 270 < th dose independent rect. 21 11
5 16.54 humidity 50.0 270 > th dose independent rect. 21 11
7 16.54 atmosphere 995.0 270 > th dose independent rect. 21 11
8 16.54 temperature 10.0 270 > th dose independent rect. 8 13
9 16.56 precipitation 0.1 270 < th dose independent rect. 8 13
10 16.56 precipitation 0.1 270 < th dose dependent rect. 8 13
11 16.59 wind 9.0 270 < th dose independent rect. 21 11
14 16.71 precipitation 0.1 270 < th dose independent rect. 21 11
15 16.71 precipitation 0.1 270 < th dose dependent rect. 21 11
17 16.81 precipitation 0.1 270 < th dose independent rect. 1 11
18 16.81 precipitation 0.1 270 < th dose dependent rect. 1 11
19 16.84 temperature 10.0 270 > th dose independent rect. 1 11
20 16.84 atmosphere 995.0 270 > th dose independent rect. 1 11
21 16.84 atmosphere 1015.0 270 < th dose independent rect. 1 11
22 16.84 temperature 10.0 270 > th dose independent rect. 12 13
36 16.96 wind 9.0 270 < th dose independent rect. 12 13
37 17.01 temperature 10.0 270 > th dose dependent rect. 3 13
41 17.06 wind 9.0 270 < th dose independent rect. 8 13
42 17.07 wind 9.0 270 < th dose independent rect. 1 11
47 17.28 atmosphere 995.0 270 > th dose independent rect. 8 13
48 17.28 humidity 50.0 270 > th dose dependent rect. 21 11
49 17.28 radiation 40.0 270 < th dose dependent rect. 21 11
52 17.31 temperature 10.0 720 > th dose dependent rect. 5 3
54 17.36 temperature 30.0 90 < th dose independent rect. 18 18
55 17.38 temperature 30.0 270 < th dose independent rect. 16 20
56 17.39 precipitation 0.1 270 < th dose independent rect. 12 13
57 17.39 precipitation 0.1 270 < th dose dependent rect. 12 13
60 17.45 wind 1.0 270 > th dose independent rect. 17 11
62 17.47 wind 1.0 270 > th dose independent rect. 12 4
64 17.49 temperature 10.0 270 > th dose dependent rect. 11 5
66 17.51 temperature 20.0 270 > th dose independent rect. 12 4
69 17.52 temperature 15.0 270 > th dose independent rect. 4 13
73 17.54 wind 9.0 270 < th dose independent rect. 12 4
77 17.56 radiation 20.0 270 < th dose independent rect. 16 11
78 17.56 precipitation 0.1 270 < th dose independent rect. 16 20
81 17.56 precipitation 0.1 270 < th dose dependent rect. 16 20
84 17.57 atmosphere 1010.0 270 < th dose independent rect. 11 6
85 17.57 wind 9.0 270 < th dose independent rect. 3 13
86 17.57 atmosphere 995.0 270 > th dose independent rect. 16 20
91 17.62 wind 7.0 720 < th dose independent rect. 24 5
92 17.62 temperature 10.0 1440 > th dose independent rect. 13 6
96 17.62 temperature 10.0 1440 > th dose independent rect. 19 18
99 17.62 atmosphere 995.0 1440 > th dose independent rect. 19 18
102 17.63 humidity 50.0 270 > th dose independent rect. 12 3
103 17.63 temperature 10.0 270 > th dose independent rect. 12 4
108 17.63 temperature 10.0 270 > th dose independent rect. 16 20
113 17.64 precipitation 0.1 270 < th dose independent rect. 12 4
114 17.64 wind 9.0 90 < th dose independent rect. 12 6
115 17.64 humidity 50.0 270 > th dose independent rect. 1 11
116 17.64 precipitation 0.1 270 < th dose dependent rect. 12 4
119 17.66 wind 1.0 90 > th dose independent rect. 12 6
124 17.69 radiation 1.0 720 < th dose dependent rect. 24 5
132 17.70 radiation 1.0 720 < th dose independent rect. 24 5
140 17.71 temperature 10.0 720 > th dose independent rect. 24 5
141 17.71 temperature 30.0 720 < th dose independent rect. 24 5
142 17.71 humidity 50.0 720 > th dose independent rect. 24 5
145 17.71 atmosphere 995.0 720 > th dose independent rect. 24 5
151 17.71 temperature 10.0 720 > th dose independent rect. 5 19
158 17.74 temperature 15.0 720 > th dose independent rect. 5 3
162 17.74 wind 9.0 720 < th dose independent rect. 17 19
164 17.75 humidity 50.0 270 > th dose independent rect. 15 21
165 17.76 wind 9.0 270 < th dose independent rect. 17 11
172 17.77 precipitation 0.1 90 < th dose independent rect. 18 18
176 17.77 precipitation 0.1 90 < th dose dependent rect. 18 18
182 17.78 temperature 10.0 90 > th dose independent rect. 18 18
183 17.78 atmosphere 995.0 90 > th dose independent rect. 18 18
187 17.79 temperature 10.0 270 > th dose independent rect. 17 11
192 17.79 atmosphere 1015.0 270 < th dose independent rect. 4 13
194 17.80 atmosphere 995.0 270 > th dose independent rect. 12 3
198 17.80 temperature 30.0 90 < th dose independent rect. 18 11
200 17.80 wind 1.0 270 > th dose independent rect. 12 13
205 17.80 temperature 10.0 270 > th dose dependent rect. 22 19
210 17.81 radiation 40.0 270 < th dose dependent rect. 16 11
213 17.82 humidity 90.0 270 < th dose independent rect. 12 4
222 17.83 humidity 50.0 30 > th dose independent rect. 12 6
232 17.85 humidity 50.0 270 > th dose independent rect. 17 11
233 17.85 humidity 50.0 270 > th dose independent rect. 17 18
242 17.87 atmosphere 995.0 270 > th dose independent rect. 17 11
245 17.88 precipitation 0.1 30 < th dose independent rect. 12 6
248 17.88 precipitation 0.1 270 < th dose independent rect. 4 13
250 17.88 precipitation 0.1 30 < th dose dependent rect. 12 6
251 17.88 precipitation 0.1 270 < th dose dependent rect. 4 13
252 17.89 precipitation 0.1 270 < th dose independent rect. 11 6
256 17.89 precipitation 0.1 270 < th dose dependent rect. 11 6
264 17.90 radiation 1.0 90 > th dose independent rect. 12 21
271 17.91 temperature 10.0 720 > th dose independent rect. 9 10
272 17.91 atmosphere 1015.0 720 < th dose independent rect. 9 10
274 17.91 temperature 10.0 720 > th dose independent rect. 19 14
275 17.91 humidity 50.0 720 > th dose independent rect. 19 14
276 17.91 atmosphere 995.0 720 > th dose independent rect. 19 14
295 17.93 temperature 10.0 720 > th dose independent rect. 14 10
304 17.93 temperature 10.0 720 > th dose independent rect. 24 14
305 17.93 atmosphere 995.0 720 > th dose independent rect. 24 14
308 17.93 wind 9.0 720 < th dose dependent rect. 5 3
313 17.94 humidity 50.0 720 > th dose independent rect. 17 3
314 17.94 wind 5.0 270 < th dose independent rect. 17 4
315 17.94 humidity 90.0 270 < th dose independent rect. 11 6
324 17.95 wind 1.0 270 > th dose independent rect. 1 11
329 17.96 radiation 10.0 720 < th dose independent rect. 17 3
336 17.97 radiation 30.0 720 < th dose independent rect. 5 3
337 17.97 precipitation 0.1 720 < th dose independent rect. 24 5
340 17.97 precipitation 0.1 270 < th dose independent rect. 17 11
344 17.97 wind 1.0 270 > th dose independent rect. 16 20
345 17.97 precipitation 0.1 720 < th dose dependent rect. 24 5
346 17.97 precipitation 0.1 270 < th dose dependent rect. 17 11
350 17.98 atmosphere 1015.0 90 < th dose independent rect. 18 18
352 17.98 atmosphere 1015.0 270 < th dose independent rect. 16 20
353 17.98 wind 9.0 270 < th dose dependent rect. 17 4
355 17.98 wind 1.0 90 > th dose dependent rect. 12 6
376 18.00 temperature 30.0 270 < th dose independent rect. 17 4
389 18.00 radiation 10.0 90 < th dose dependent rect. 18 11
397 18.01 radiation 20.0 720 < th dose dependent rect. 17 2
449 18.06 precipitation 0.1 720 < th dose independent rect. 5 3
450 18.06 precipitation 0.1 720 < th dose independent rect. 4 5
456 18.06 precipitation 0.1 720 < th dose dependent rect. 5 3
457 18.06 atmosphere 1015.0 270 < th dose dependent rect. 12 4
458 18.06 precipitation 0.1 720 < th dose dependent rect. 4 5
461 18.07 wind 7.0 720 < th dose independent rect. 5 4
471 18.08 wind 9.0 720 < th dose independent rect. 15 14
478 18.08 atmosphere 1015.0 90 < th dose dependent rect. 5 13
485 18.09 wind 1.0 270 > th dose independent rect. 8 13
492 18.10 humidity 60.0 720 > th dose independent rect. 5 4
493 18.10 humidity 70.0 270 > th dose independent rect. 17 4
508 18.11 wind 9.0 720 < th dose independent rect. 19 14
509 18.11 radiation 1.0 30 > th dose independent rect. 12 23
510 18.11 atmosphere 1015.0 270 < th dose dependent rect. 13 2
545 18.14 temperature 30.0 720 < th dose independent rect. 5 3
549 18.14 atmosphere 995.0 720 > th dose independent rect. 5 3
550 18.14 atmosphere 1015.0 720 < th dose independent rect. 5 3
552 18.14 atmosphere 995.0 30 > th dose independent rect. 12 6
565 18.14 temperature 10.0 720 > th dose independent rect. 8 21
570 18.15 atmosphere 995.0 270 > th dose independent rect. 11 6
573 18.15 radiation 40.0 720 < th dose independent rect. 19 14
577 18.15 wind 9.0 270 < th dose independent rect. 21 20
613 18.17 precipitation 0.1 720 < th dose independent rect. 9 10
617 18.17 temperature 10.0 720 > th dose independent rect. 9 19
620 18.17 precipitation 0.1 720 < th dose dependent rect. 9 10
621 18.18 wind 1.0 720 > th dose independent rect. 17 3
622 18.18 temperature 10.0 720 > th dose independent rect. 17 3
623 18.18 atmosphere 1015.0 720 < th dose independent rect. 17 3
637 18.18 temperature 10.0 720 > th dose independent rect. 20 21
638 18.18 humidity 50.0 270 > th dose dependent rect. 17 4
641 18.18 atmosphere 1015.0 30 < th dose dependent rect. 12 6
658 18.19 precipitation 0.1 720 < th dose independent rect. 20 13
659 18.19 wind 9.0 720 < th dose independent rect. 24 14
664 18.19 precipitation 0.1 720 < th dose dependent rect. 20 13
683 18.21 radiation 1.0 270 > th dose independent rect. 12 4
693 18.21 radiation 40.0 90 < th dose dependent sin 13 NA
762 18.26 precipitation 0.1 720 < th dose independent rect. 17 3
782 18.26 precipitation 0.1 720 < th dose dependent rect. 17 3
789 18.27 atmosphere 995.0 270 > th dose independent rect. 17 4
791 18.27 precipitation 0.1 720 < th dose independent rect. 5 10
797 18.27 radiation 10.0 90 < th dose dependent sin 13 NA
799 18.27 radiation 1.0 720 < th dose dependent rect. 24 10
800 18.27 precipitation 0.1 720 < th dose dependent rect. 5 10
808 18.28 precipitation 0.1 720 < th dose independent rect. 20 21
817 18.28 precipitation 0.1 720 < th dose dependent rect. 20 21
826 18.29 humidity 70.0 10 > th dose independent rect. 18 12
828 18.29 humidity 50.0 90 > th dose independent rect. 5 13
845 18.30 atmosphere 1015.0 90 < th dose independent rect. 18 11
857 18.30 radiation 40.0 270 < th dose dependent rect. 8 14
858 18.30 radiation 1.0 270 > th dose dependent rect. 12 20
864 18.31 temperature 10.0 720 > th dose independent rect. 5 10
866 18.31 atmosphere 1015.0 720 < th dose independent rect. 5 10
868 18.31 humidity 50.0 270 > th dose independent rect. 3 13
869 18.31 temperature 10.0 720 > th dose independent rect. 15 14
900 18.32 radiation 40.0 720 < th dose independent rect. 15 14
902 18.32 precipitation 0.1 720 < th dose independent rect. 21 19
905 18.32 wind 1.0 270 > th dose dependent rect. 12 3
911 18.32 precipitation 0.1 720 < th dose dependent rect. 21 19
930 18.33 radiation 10.0 10 < th dose dependent rect. 18 12
993 18.36 temperature 10.0 270 > th dose dependent rect. 17 5