Os10g0521300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Inner membrane protein OXA1-like, mitochondrial precursor.
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Os10g0521300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Inner membrane protein OXA1-like, mitochondrial precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.89 | 0.474 | 8.63 | 0.114 | 0.416 | 0.955 | 0.851 | 0.566 | 0.173 | 14.8 | 20.12 | 338 | -- | -- |
| 102.07 | 0.471 | 8.65 | 0.0401 | 0.425 | 0.851 | 0.992 | -- | 0.151 | 15.1 | 20.4 | 333 | -- | -- |
| 104.18 | 0.475 | 8.63 | 0.186 | 0.42 | 0.932 | -- | 0.712 | 0.171 | 14.6 | 20.3 | 344 | -- | -- |
| 105.36 | 0.478 | 8.65 | 0.0528 | 0.431 | 0.865 | -- | -- | 0.15 | 14.8 | 20.42 | 345 | -- | -- |
| 111.59 | 0.492 | 8.62 | 0.197 | -- | 1.1 | -- | 0.996 | 0.203 | -- | 20.17 | 229 | -- | -- |
| 125.78 | 0.526 | 8.61 | 0.313 | 0.533 | -- | 1.05 | -- | 0.321 | 15.4 | -- | -- | -- | -- |
| 129.23 | 0.532 | 8.61 | 0.333 | 0.536 | -- | -- | -- | 0.327 | 15.3 | -- | -- | -- | -- |
| 113.32 | 0.496 | 8.65 | 0.0438 | -- | 0.949 | -- | -- | 0.125 | -- | 20.5 | 213 | -- | -- |
| 105.43 | 0.478 | 8.65 | -- | 0.429 | 0.877 | -- | -- | 0.142 | 14.8 | 20.43 | 345 | -- | -- |
| 145.53 | 0.564 | 8.61 | 0.31 | -- | -- | -- | -- | 0.313 | -- | -- | -- | -- | -- |
| 132.15 | 0.538 | 8.62 | -- | 0.53 | -- | -- | -- | 0.29 | 15.3 | -- | -- | -- | -- |
| 113.32 | 0.496 | 8.65 | -- | -- | 0.943 | -- | -- | 0.128 | -- | 20.5 | 213 | -- | -- |
| 148.06 | 0.568 | 8.62 | -- | -- | -- | -- | -- | 0.278 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 92.01 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 3 | 92.87 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 19 |
| 4 | 92.94 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 16 |
| 5 | 93.01 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 7 | 93.15 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 17 | 94.29 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 29 | 95.18 | temperature | 15.0 | 90 | > th | dose dependent | sin | 6 | NA |
| 67 | 96.87 | temperature | 30.0 | 90 | < th | dose dependent | sin | 6 | NA |
| 73 | 97.04 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 19 | 21 |
| 93 | 97.48 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 110 | 97.90 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 113 | 98.05 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 21 | 18 |
| 115 | 98.08 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 19 |
| 141 | 98.50 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 19 |
| 143 | 98.56 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 150 | 98.65 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 20 |
| 168 | 98.89 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 8 | 19 |
| 169 | 98.91 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 17 |
| 310 | 100.68 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 16 |
| 345 | 101.01 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 22 |
| 406 | 101.51 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 407 | 101.52 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 10 |
| 411 | 101.55 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 418 | 101.58 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 423 | 101.59 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 437 | 101.65 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 14 | 16 |
| 439 | 101.66 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 10 |
| 446 | 101.70 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 9 | 21 |
| 448 | 101.71 | temperature | 20.0 | 270 | < th | dose independent | rect. | 21 | 23 |
| 476 | 101.80 | temperature | 20.0 | 270 | < th | dose independent | rect. | 9 | 23 |
| 482 | 101.84 | temperature | 20.0 | 1440 | > th | dose independent | sin | 14 | NA |
| 483 | 101.84 | temperature | 20.0 | 270 | < th | dose independent | sin | 9 | NA |
| 485 | 101.85 | temperature | 20.0 | 270 | > th | dose independent | sin | 9 | NA |
| 497 | 101.89 | temperature | 20.0 | 270 | < th | dose independent | rect. | 15 | 21 |
| 551 | 102.07 | temperature | 20.0 | 10 | > th | dose independent | rect. | 19 | 21 |
| 558 | 102.09 | temperature | 20.0 | 270 | > th | dose independent | no | NA | NA |
| 583 | 102.20 | temperature | 20.0 | 270 | < th | dose independent | no | NA | NA |
| 586 | 102.22 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 18 | 12 |
| 603 | 102.29 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 14 | 16 |
| 628 | 102.35 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 674 | 102.47 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 18 |
| 685 | 102.50 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 725 | 102.57 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 21 |
| 751 | 102.61 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 756 | 102.62 | temperature | 20.0 | 1440 | < th | dose independent | sin | 14 | NA |
| 799 | 102.70 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 14 | 21 |
| 840 | 102.77 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 886 | 102.86 | temperature | 20.0 | 1440 | > th | dose independent | no | NA | NA |
| 892 | 102.87 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 903 | 102.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 910 | 102.90 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 920 | 102.92 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 23 |