FiT-DB / Search/ Help/ Sample detail

Os10g0519600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF791 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.018) R2 : 0.0029
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0437 (0.0379) R2dN8 : 0.00375 R2N8 : 0.0029
σ : 0.339
deviance : 52.87
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.13 0.221 10.1 0.397 0.473 0.409 0.724 -1.49 0.146 23.5 29.59 3468 -- --
22.23 0.22 10.1 0.631 0.475 0.244 0.724 -- 0.156 23.5 29.4 3449 -- --
24.38 0.23 10.1 0.397 0.469 0.398 -- -1.31 0.147 23.6 29.75 3500 -- --
24.22 0.229 10.1 0.591 0.46 0.245 -- -- 0.143 23.6 29.1 2381 -- --
36.55 0.282 10.1 0.488 -- 0.401 -- -0.23 0.0568 -- 24.7 2356 -- --
23.89 0.229 10.1 0.678 0.493 -- 0.747 -- 0.115 23.5 -- -- -- --
26.3 0.24 10.1 0.647 0.489 -- -- -- 0.111 23.7 -- -- -- --
33.93 0.271 10.1 0.514 -- 0.57 -- -- 0.0365 -- 24.74 929 -- --
32.61 0.266 10.1 -- 0.446 0.377 -- -- 0.041 24 25.7 2277 -- --
41.34 0.3 10.1 0.661 -- -- -- -- 0.117 -- -- -- -- --
37.34 0.286 10.1 -- 0.497 -- -- -- 0.0392 23.7 -- -- -- --
40.68 0.297 10.1 -- -- 0.627 -- -- -0.00731 -- 24.39 939 -- --
52.87 0.339 10.1 -- -- -- -- -- 0.0437 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.29 temperature 20 720 > th dose dependent rect. 17 3
32 20.95 temperature 15 270 > th dose dependent rect. 17 11
41 21.03 temperature 30 720 < th dose dependent rect. 16 3
50 21.05 temperature 15 90 > th dose dependent rect. 19 10
54 21.09 temperature 30 720 < th dose dependent rect. 15 6
77 21.19 temperature 30 720 < th dose independent rect. 16 16
101 21.25 humidity 70 720 < th dose independent rect. 17 16
102 21.25 humidity 70 720 > th dose independent rect. 16 17
108 21.26 humidity 70 720 < th dose independent sin 11 NA
116 21.27 temperature 20 90 > th dose independent rect. 19 10
129 21.31 humidity 70 720 > th dose independent sin 11 NA
130 21.31 temperature 20 720 > th dose independent rect. 17 4
134 21.32 temperature 30 720 < th dose independent rect. 16 9
148 21.34 temperature 20 10 > th dose independent rect. 19 11
219 21.46 temperature 30 720 < th dose independent rect. 16 1
220 21.46 temperature 20 270 > th dose independent rect. 17 11
237 21.48 temperature 25 720 > th dose independent rect. 19 1
238 21.48 humidity 70 720 < th dose independent rect. 17 3
269 21.51 humidity 70 720 > th dose independent rect. 16 8
299 21.54 temperature 30 270 < th dose dependent rect. 14 17
300 21.55 temperature 30 720 > th dose independent rect. 17 1
321 21.56 temperature 30 720 < th dose independent sin 12 NA
352 21.58 radiation 1 720 > th dose dependent rect. 18 1
372 21.60 temperature 30 720 < th dose independent rect. 15 3
388 21.60 temperature 20 720 > th dose dependent sin 17 NA
398 21.61 temperature 25 720 > th dose dependent sin 14 NA
415 21.62 temperature 20 720 > th dose independent rect. 11 9
436 21.63 temperature 30 720 < th dose independent rect. 14 5
449 21.64 temperature 30 720 > th dose independent sin 13 NA
487 21.67 radiation 1 720 > th dose independent rect. 18 11
489 21.67 humidity 70 720 > th dose independent rect. 5 19
518 21.69 radiation 1 720 > th dose independent rect. 18 1
603 21.74 wind 1 43200 < th dose dependent rect. 19 2
643 21.75 temperature 10 270 > th dose dependent sin 14 NA
679 21.77 humidity 80 43200 < th dose independent rect. 22 1
681 21.77 temperature 20 720 > th dose independent rect. 5 4
687 21.77 humidity 80 720 < th dose dependent rect. 17 1
703 21.78 radiation 30 720 < th dose independent rect. 15 17
715 21.79 temperature 20 720 > th dose independent rect. 6 2
730 21.80 humidity 80 43200 > th dose independent rect. 22 1
736 21.80 radiation 10 10 < th dose independent rect. 4 16
737 21.80 wind 5 43200 < th dose independent rect. 16 17
758 21.81 wind 5 43200 < th dose independent rect. 17 14
782 21.82 wind 5 43200 > th dose independent rect. 16 17
804 21.83 humidity 70 720 < th dose dependent rect. 19 1
824 21.83 wind 3 43200 > th dose dependent rect. 17 15
833 21.84 wind 5 43200 > th dose independent rect. 15 19
852 21.85 wind 5 43200 < th dose independent sin 12 NA
862 21.85 wind 5 43200 < th dose independent rect. 17 22
863 21.85 wind 5 43200 < th dose independent rect. 15 23
896 21.86 wind 5 43200 > th dose independent rect. 17 14
903 21.86 wind 5 43200 > th dose independent rect. 21 22
906 21.86 wind 5 43200 < th dose independent rect. 21 22
907 21.86 wind 5 43200 > th dose independent rect. 17 23
924 21.87 temperature 20 720 > th dose independent rect. 9 12
932 21.87 wind 5 43200 > th dose independent rect. 15 23
935 21.87 wind 5 43200 > th dose dependent sin 13 NA
944 21.87 wind 5 43200 > th dose dependent rect. 15 18
945 21.87 wind 5 43200 > th dose dependent rect. 15 20
946 21.87 wind 5 43200 > th dose dependent rect. 15 23
958 21.88 wind 5 43200 > th dose independent rect. 13 22
969 21.88 temperature 30 270 < th dose dependent sin 14 NA
982 21.89 wind 5 43200 > th dose independent sin 12 NA
983 21.89 wind 5 43200 > th dose independent no NA NA
985 21.89 wind 5 43200 < th dose independent no NA NA