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Os10g0518800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.3 (0.015) R2 : 0.456
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.739 (0.038) R2dC : 0.451 R2C : 0.444
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0853 (0.0315) R2dN8 : 0.0113 R2N8 : 0.00515
σ : 0.283
deviance : 36.5
__
_____
C
peak time of C : 3.75
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.43 0.251 9.28 0.286 0.529 0.472 -0.341 -0.59 0.0266 3.25 88.72 249 -- --
29.11 0.251 9.28 0.265 0.529 0.465 -0.411 -- 0.022 3.1 89.08 261 -- --
28.58 0.249 9.29 0.312 0.533 0.424 -- -0.795 0.0261 3.4 87.64 199 -- --
30.08 0.255 9.28 0.268 0.537 0.426 -- -- 0.0159 3.29 88.81 255 -- --
33.87 0.271 9.29 0.316 -- 0.723 -- -0.878 0.0138 -- 73.38 186 -- --
33.27 0.27 9.29 0.317 0.734 -- -0.397 -- -0.0516 3.74 -- -- -- --
33.74 0.272 9.29 0.323 0.732 -- -- -- -0.0493 3.75 -- -- -- --
35.39 0.277 9.28 0.299 -- 0.697 -- -- 0.0208 -- 73.08 168 -- --
32 0.263 9.28 -- 0.521 0.464 -- -- -0.0051 3.23 88.54 261 -- --
63.37 0.372 9.29 0.354 -- -- -- -- -0.0298 -- -- -- -- --
36.5 0.283 9.3 -- 0.739 -- -- -- -0.0853 3.75 -- -- -- --
37.71 0.286 9.29 -- -- 0.709 -- -- -0.00823 -- 74.3 170 -- --
66.67 0.381 9.3 -- -- -- -- -- -0.069 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 24.31 temperature 15.0 270 > th dose independent rect. 6 20
3 24.85 temperature 15.0 270 > th dose independent rect. 17 9
4 24.88 radiation 1.0 270 > th dose independent rect. 17 21
5 24.93 temperature 15.0 270 > th dose independent rect. 7 18
8 25.04 humidity 50.0 270 > th dose independent rect. 13 17
10 25.24 radiation 1.0 270 < th dose independent rect. 3 14
14 25.30 humidity 50.0 270 > th dose independent rect. 2 15
16 25.34 temperature 15.0 270 > th dose independent rect. 6 7
17 25.34 radiation 1.0 270 > th dose independent rect. 6 7
19 25.35 precipitation 0.1 270 < th dose independent rect. 16 10
20 25.35 precipitation 0.1 270 < th dose dependent rect. 16 10
27 25.48 radiation 1.0 270 < th dose dependent rect. 3 15
29 25.60 humidity 90.0 90 < th dose independent rect. 8 6
30 25.61 temperature 15.0 270 > th dose independent rect. 21 15
37 25.69 temperature 15.0 10 > th dose independent rect. 8 21
39 25.72 radiation 20.0 270 < th dose independent rect. 17 9
42 25.72 temperature 10.0 270 > th dose independent rect. 2 15
43 25.72 atmosphere 1015.0 270 < th dose independent rect. 2 15
44 25.75 temperature 15.0 90 > th dose independent rect. 8 6
50 25.79 wind 9.0 270 < th dose independent rect. 17 9
51 25.79 atmosphere 995.0 270 > th dose independent rect. 17 9
53 25.80 temperature 10.0 270 > th dose dependent rect. 17 9
55 25.81 humidity 80.0 90 > th dose dependent rect. 4 15
64 25.88 precipitation 0.1 270 < th dose independent rect. 6 20
65 25.88 precipitation 0.1 270 < th dose dependent rect. 6 20
67 25.90 humidity 90.0 270 < th dose independent rect. 6 6
68 25.90 humidity 50.0 270 > th dose dependent rect. 14 16
72 25.92 atmosphere 1010.0 10 < th dose independent rect. 5 3
73 25.92 temperature 20.0 10 > th dose independent rect. 8 7
75 25.94 wind 9.0 270 < th dose independent rect. 2 15
78 25.95 humidity 90.0 90 > th dose independent rect. 4 15
80 25.96 humidity 90.0 90 > th dose independent rect. 4 17
82 25.98 radiation 1.0 270 < th dose independent sin 3 NA
83 25.98 wind 7.0 270 < th dose independent rect. 6 7
89 26.00 radiation 1.0 270 < th dose independent rect. 3 8
94 26.02 temperature 15.0 10 > th dose independent rect. 19 10
103 26.03 precipitation 0.1 270 < th dose independent rect. 2 15
105 26.03 precipitation 0.1 270 < th dose dependent rect. 2 15
107 26.04 radiation 1.0 270 > th dose independent sin 3 NA
113 26.05 radiation 1.0 10 < th dose dependent sin 12 NA
114 26.05 humidity 50.0 10 > th dose dependent rect. 15 17
119 26.07 humidity 70.0 10 > th dose dependent rect. 5 13
120 26.07 humidity 90.0 90 > th dose dependent rect. 4 19
124 26.09 wind 9.0 270 < th dose independent rect. 13 17
126 26.09 humidity 50.0 10 > th dose dependent rect. 5 13
127 26.10 humidity 50.0 270 > th dose independent rect. 6 7
128 26.10 precipitation 0.1 270 < th dose independent rect. 6 7
129 26.10 precipitation 0.1 270 < th dose dependent rect. 6 7
130 26.10 radiation 40.0 270 < th dose dependent rect. 17 9
131 26.10 temperature 10.0 10 > th dose dependent rect. 8 21
132 26.11 humidity 80.0 90 > th dose dependent rect. 4 17
137 26.16 wind 9.0 270 < th dose independent rect. 2 4
138 26.16 temperature 10.0 270 > th dose independent rect. 2 4
140 26.16 temperature 30.0 270 < th dose independent rect. 2 4
141 26.16 humidity 50.0 270 > th dose independent rect. 2 4
144 26.16 atmosphere 995.0 270 > th dose independent rect. 2 4
145 26.16 atmosphere 1015.0 270 < th dose independent rect. 2 4
146 26.16 radiation 20.0 270 < th dose independent rect. 2 4
159 26.17 atmosphere 995.0 270 > th dose independent rect. 6 7
160 26.17 atmosphere 1015.0 270 < th dose independent rect. 6 7
162 26.17 temperature 10.0 270 > th dose independent rect. 13 17
163 26.17 humidity 50.0 270 > th dose dependent rect. 2 4
173 26.21 wind 9.0 270 < th dose independent rect. 6 20
175 26.22 precipitation 0.1 270 < th dose independent rect. 2 4
177 26.22 humidity 50.0 10 > th dose dependent rect. 5 3
178 26.22 radiation 40.0 270 < th dose dependent rect. 2 4
179 26.22 precipitation 0.1 270 < th dose dependent rect. 2 4
180 26.22 radiation 1.0 270 < th dose dependent rect. 3 8
205 26.26 radiation 10.0 90 < th dose dependent rect. 18 10
211 26.27 humidity 50.0 90 > th dose independent rect. 18 10
215 26.27 temperature 10.0 90 > th dose independent rect. 4 14
216 26.27 atmosphere 1015.0 90 < th dose independent rect. 4 14
224 26.28 radiation 40.0 90 < th dose independent rect. 14 18
225 26.28 atmosphere 995.0 10 > th dose independent rect. 8 21
226 26.28 atmosphere 1015.0 90 < th dose dependent rect. 4 3
229 26.29 wind 9.0 90 < th dose independent rect. 8 6
231 26.29 wind 7.0 90 < th dose independent rect. 8 20
235 26.30 atmosphere 1015.0 270 < th dose dependent rect. 2 4
239 26.31 atmosphere 995.0 270 > th dose independent rect. 6 20
272 26.37 wind 9.0 10 < th dose independent rect. 15 17
276 26.37 wind 9.0 270 < th dose dependent rect. 3 3
277 26.38 radiation 1.0 10 < th dose independent sin 12 NA
280 26.38 radiation 1.0 270 < th dose dependent sin 2 NA
286 26.39 radiation 1.0 10 > th dose independent sin 12 NA
287 26.39 humidity 90.0 10 < th dose independent rect. 8 7
292 26.39 humidity 50.0 90 > th dose dependent rect. 4 14
295 26.40 wind 9.0 10 < th dose independent rect. 8 7
299 26.41 wind 1.0 90 > th dose independent rect. 8 6
324 26.44 wind 7.0 10 < th dose independent rect. 8 21
327 26.45 precipitation 0.1 90 < th dose independent rect. 4 14
331 26.45 precipitation 0.1 90 < th dose dependent rect. 4 14
336 26.46 radiation 1.0 10 > th dose independent rect. 15 17
337 26.46 precipitation 0.1 10 < th dose independent rect. 8 21
339 26.46 precipitation 0.1 10 < th dose dependent rect. 8 21
342 26.47 atmosphere 995.0 90 > th dose independent rect. 8 6
343 26.47 atmosphere 1015.0 90 < th dose independent rect. 8 6
344 26.47 precipitation 0.1 90 < th dose independent rect. 8 6
353 26.47 precipitation 0.1 90 < th dose dependent rect. 8 6
355 26.48 wind 9.0 90 < th dose independent rect. 4 14
363 26.49 temperature 10.0 10 > th dose independent rect. 8 7
365 26.49 atmosphere 995.0 10 > th dose independent rect. 8 7
366 26.49 atmosphere 1015.0 10 < th dose independent rect. 8 7
367 26.49 precipitation 0.1 10 < th dose independent rect. 8 7
368 26.49 temperature 10.0 10 > th dose independent rect. 15 17
372 26.49 precipitation 0.1 10 < th dose dependent rect. 8 7
385 26.51 atmosphere 995.0 90 > th dose independent rect. 8 20
388 26.51 atmosphere 1015.0 10 < th dose dependent rect. 5 3
402 26.53 atmosphere 995.0 270 > th dose independent rect. 2 14
405 26.54 wind 1.0 10 > th dose independent rect. 8 7
409 26.54 wind 9.0 90 < th dose dependent rect. 18 10
413 26.56 wind 7.0 10 < th dose independent rect. 5 3
415 26.56 temperature 10.0 10 > th dose independent rect. 5 3
417 26.56 temperature 30.0 10 < th dose independent rect. 5 3
418 26.56 humidity 50.0 10 > th dose independent rect. 5 3
420 26.56 atmosphere 995.0 10 > th dose independent rect. 5 3
423 26.56 humidity 50.0 90 > th dose independent rect. 8 6
432 26.57 precipitation 0.1 10 < th dose independent rect. 5 3
435 26.57 radiation 40.0 10 < th dose independent rect. 15 17
438 26.57 precipitation 0.1 10 < th dose dependent rect. 5 3
450 26.59 humidity 50.0 10 > th dose independent rect. 15 17
452 26.59 radiation 40.0 30 < th dose dependent rect. 5 3
463 26.60 wind 9.0 270 < th dose dependent rect. 6 6
501 26.65 radiation 40.0 10 < th dose independent rect. 5 3
502 26.65 precipitation 0.1 270 < th dose independent rect. 13 17
504 26.65 precipitation 0.1 270 < th dose dependent rect. 13 17
505 26.66 radiation 1.0 10 > th dose independent rect. 8 7
507 26.66 radiation 20.0 30 < th dose dependent rect. 5 3
509 26.66 temperature 10.0 10 > th dose dependent rect. 6 23
519 26.68 wind 9.0 10 < th dose dependent rect. 5 3
520 26.68 humidity 80.0 90 > th dose dependent rect. 4 7
530 26.70 temperature 10.0 270 > th dose dependent rect. 6 6
534 26.71 temperature 10.0 1440 > th dose independent rect. 9 7
537 26.71 temperature 10.0 1440 > th dose independent rect. 16 17
548 26.72 temperature 30.0 270 < th dose dependent rect. 2 4
556 26.74 temperature 15.0 270 > th dose independent rect. 17 20
559 26.75 precipitation 0.1 10 < th dose independent rect. 19 10
571 26.75 precipitation 0.1 10 < th dose dependent rect. 19 10
592 26.77 wind 1.0 270 > th dose independent rect. 6 7
595 26.77 humidity 90.0 90 > th dose independent rect. 4 8
598 26.77 radiation 1.0 10 < th dose dependent rect. 19 10
617 26.80 wind 9.0 10 < th dose independent rect. 19 10
661 26.82 temperature 30.0 10 < th dose independent rect. 19 10
662 26.82 humidity 50.0 10 > th dose independent rect. 19 10
664 26.82 atmosphere 995.0 10 > th dose independent rect. 19 10
665 26.82 radiation 1.0 10 < th dose independent rect. 19 10
670 26.82 temperature 10.0 10 > th dose independent rect. 5 14
672 26.82 atmosphere 1015.0 10 < th dose independent rect. 5 14
677 26.82 temperature 10.0 90 > th dose dependent rect. 8 6
703 26.84 temperature 10.0 270 > th dose dependent rect. 6 20
710 26.85 temperature 10.0 10 > th dose dependent rect. 19 10
712 26.85 temperature 10.0 270 > th dose dependent rect. 18 18
732 26.87 temperature 30.0 90 < th dose independent rect. 19 9
761 26.88 precipitation 0.1 10 < th dose independent rect. 15 17
764 26.88 humidity 80.0 270 > th dose dependent rect. 2 17
765 26.88 precipitation 0.1 10 < th dose dependent rect. 15 17
766 26.88 temperature 10.0 270 > th dose dependent rect. 7 18
767 26.88 wind 9.0 270 < th dose dependent rect. 6 20
784 26.89 wind 9.0 90 < th dose dependent rect. 8 20
802 26.91 wind 9.0 10 < th dose independent rect. 5 14
803 26.91 precipitation 0.1 10 < th dose independent rect. 5 14
809 26.91 precipitation 0.1 10 < th dose dependent rect. 5 14
833 26.93 radiation 1.0 10 > th dose independent rect. 15 15
835 26.93 atmosphere 1010.0 10 < th dose independent rect. 8 21
836 26.93 radiation 40.0 10 < th dose dependent rect. 5 13
852 26.94 humidity 90.0 90 > th dose dependent rect. 4 21
865 26.96 humidity 90.0 270 < th dose independent rect. 17 19
878 26.97 humidity 50.0 270 > th dose dependent rect. 2 15
887 26.98 atmosphere 995.0 270 > th dose independent rect. 13 17
927 27.01 atmosphere 995.0 30 > th dose independent rect. 6 23
962 27.03 temperature 10.0 10 > th dose dependent rect. 8 7