Os10g0517800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os10g0517800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 196.71 | 0.659 | 9.6 | -3.69 | 2.28 | -3.83 | -0.114 | -1.41 | -1.31 | 18 | 25.3 | 4515 | -- | -- |
| 196.95 | 0.654 | 9.62 | -3.6 | 2.19 | -3.46 | -0.103 | -- | -1.25 | 17.8 | 29.65 | 3341 | -- | -- |
| 196.73 | 0.653 | 9.6 | -3.69 | 2.28 | -3.84 | -- | -1.41 | -1.31 | 18 | 25.3 | 4540 | -- | -- |
| 196.95 | 0.654 | 9.62 | -3.59 | 2.19 | -3.45 | -- | -- | -1.25 | 17.8 | 29.6 | 3334 | -- | -- |
| 271.93 | 0.768 | 9.63 | -3.97 | -- | -4.85 | -- | 2.04 | -1.51 | -- | 31.39 | 402 | -- | -- |
| 408.11 | 0.947 | 9.45 | -2.11 | 2.21 | -- | 0.0523 | -- | -0.454 | 18.1 | -- | -- | -- | -- |
| 408.12 | 0.946 | 9.45 | -2.11 | 2.21 | -- | -- | -- | -0.454 | 18.1 | -- | -- | -- | -- |
| 268.75 | 0.764 | 9.59 | -3.29 | -- | -4.96 | -- | -- | -1.32 | -- | 31.68 | 407 | -- | -- |
| 441.79 | 0.979 | 9.47 | -- | 2.2 | -2.11 | -- | -- | -0.539 | 18 | 45.64 | 1729 | -- | -- |
| 661.17 | 1.2 | 9.41 | -2.17 | -- | -- | -- | -- | -0.504 | -- | -- | -- | -- | -- |
| 525.48 | 1.07 | 9.39 | -- | 2.24 | -- | -- | -- | -0.219 | 18.1 | -- | -- | -- | -- |
| 529.67 | 1.07 | 9.46 | -- | -- | -3.98 | -- | -- | -0.744 | -- | 33.8 | 386 | -- | -- |
| 785.67 | 1.31 | 9.35 | -- | -- | -- | -- | -- | -0.262 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 189.90 | radiation | 10 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 2 | 191.19 | radiation | 10 | 14400 | < th | dose independent | rect. | 17 | 7 |
| 5 | 191.30 | radiation | 10 | 14400 | < th | dose independent | rect. | 17 | 10 |
| 7 | 191.33 | temperature | 25 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 15 | 192.12 | temperature | 25 | 4320 | < th | dose dependent | rect. | 15 | 12 |
| 17 | 192.36 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 4 |
| 31 | 192.85 | temperature | 15 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 46 | 193.22 | temperature | 25 | 4320 | < th | dose dependent | sin | 15 | NA |
| 65 | 193.56 | radiation | 10 | 4320 | < th | dose independent | rect. | 16 | 15 |
| 91 | 194.06 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 18 |
| 114 | 194.45 | radiation | 10 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 129 | 194.76 | radiation | 1 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 155 | 194.96 | temperature | 15 | 4320 | > th | dose dependent | rect. | 15 | 13 |
| 158 | 195.05 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 6 |
| 196 | 195.44 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 199 | 195.45 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 213 | 195.57 | temperature | 15 | 4320 | > th | dose dependent | sin | 14 | NA |
| 222 | 195.64 | radiation | 1 | 14400 | < th | dose dependent | sin | 11 | NA |
| 276 | 195.93 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 6 |
| 279 | 195.95 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 299 | 196.03 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 18 |
| 412 | 196.44 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 9 |
| 449 | 196.63 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 457 | 196.69 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 532 | 197.08 | radiation | 30 | 4320 | < th | dose dependent | rect. | 18 | 6 |
| 595 | 197.40 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 7 |
| 604 | 197.44 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 9 |
| 625 | 197.51 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 701 | 197.78 | temperature | 25 | 4320 | < th | dose dependent | rect. | 5 | 23 |
| 704 | 197.80 | radiation | 1 | 14400 | < th | dose dependent | rect. | 21 | 9 |
| 712 | 197.82 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 18 |
| 731 | 197.87 | temperature | 25 | 4320 | < th | dose dependent | no | NA | NA |
| 751 | 197.93 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 23 |
| 757 | 197.98 | radiation | 20 | 4320 | < th | dose dependent | rect. | 18 | 11 |
| 852 | 198.31 | radiation | 1 | 14400 | < th | dose dependent | rect. | 21 | 14 |
| 856 | 198.32 | temperature | 25 | 4320 | < th | dose dependent | rect. | 23 | 23 |
| 975 | 198.74 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 19 |
| 982 | 198.76 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 16 |
| 992 | 198.78 | radiation | 1 | 14400 | < th | dose independent | sin | 13 | NA |