Os10g0517400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Aldo/keto reductase family protein.
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Os10g0517400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Aldo/keto reductase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.45 | 0.32 | 12.5 | -1.58 | 0.449 | -0.434 | -0.448 | 0.319 | -0.802 | 17.9 | 19.99 | 1443 | -- | -- |
| 46.7 | 0.318 | 12.5 | -1.57 | 0.442 | -0.427 | -0.424 | -- | -0.798 | 17.9 | 19.99 | 1445 | -- | -- |
| 46.01 | 0.316 | 12.5 | -1.56 | 0.409 | -0.478 | -- | 0.538 | -0.808 | 18.8 | 19.88 | 1660 | -- | -- |
| 46.4 | 0.317 | 12.5 | -1.56 | 0.415 | -0.477 | -- | -- | -0.793 | 18.7 | 19.88 | 1656 | -- | -- |
| 51.58 | 0.334 | 12.5 | -1.7 | -- | -0.642 | -- | 0.964 | -0.846 | -- | 16.88 | 2081 | -- | -- |
| 53.76 | 0.344 | 12.5 | -1.53 | 0.44 | -- | -0.476 | -- | -0.7 | 18 | -- | -- | -- | -- |
| 54.29 | 0.345 | 12.5 | -1.53 | 0.438 | -- | -- | -- | -0.702 | 18.2 | -- | -- | -- | -- |
| 52.18 | 0.336 | 12.5 | -1.61 | -- | -0.481 | -- | -- | -0.778 | -- | 29.82 | 914 | -- | -- |
| 99.52 | 0.465 | 12.5 | -- | 0.446 | -0.509 | -- | -- | -0.647 | 18.5 | 19.99 | 26256 | -- | -- |
| 64.25 | 0.375 | 12.5 | -1.54 | -- | -- | -- | -- | -0.711 | -- | -- | -- | -- | -- |
| 115.95 | 0.504 | 12.4 | -- | 0.46 | -- | -- | -- | -0.531 | 18 | -- | -- | -- | -- |
| 76.21 | 0.407 | 12.4 | -- | -- | -1.13 | -- | -- | -0.264 | -- | 59.99 | 47520 | -- | -- |
| 126.95 | 0.526 | 12.4 | -- | -- | -- | -- | -- | -0.54 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.22 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 5 | 44.71 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 47 | 45.59 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 20 | 19 |
| 68 | 45.66 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 120 | 46.03 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 150 | 46.06 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 152 | 46.07 | radiation | 20.0 | 1440 | < th | dose independent | sin | 0 | NA |
| 174 | 46.12 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 179 | 46.15 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 12 | 13 |
| 180 | 46.16 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 12 | 10 |
| 183 | 46.16 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 12 | 17 |
| 207 | 46.24 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 259 | 46.31 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 266 | 46.32 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 275 | 46.34 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 320 | 46.40 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 343 | 46.42 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 21 |
| 351 | 46.44 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 23 | 16 |
| 384 | 46.46 | radiation | 20.0 | 1440 | < th | dose independent | no | NA | NA |
| 446 | 46.48 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 465 | 46.52 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 479 | 46.53 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 8 | 16 |
| 484 | 46.54 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 8 | 12 |
| 490 | 46.54 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 8 | 21 |
| 502 | 46.56 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 583 | 46.60 | radiation | 20.0 | 1440 | < th | dose dependent | sin | 23 | NA |
| 661 | 46.70 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 20 | 20 |
| 757 | 46.75 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 763 | 46.75 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 848 | 46.83 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 865 | 46.84 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 876 | 46.85 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 878 | 46.85 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 898 | 46.86 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 4 |
| 932 | 46.89 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 18 | 21 |
| 936 | 46.90 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 7 |
| 977 | 46.92 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |