Os10g0516900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0516900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 292.22 | 0.803 | 8.98 | -2.61 | 1.97 | 0.235 | 0.186 | -9.51 | 0.421 | 1.9 | 19.18 | 9277 | -- | -- |
| 363.31 | 0.888 | 8.6 | -0.654 | 1.88 | 1.1 | 0.0731 | -- | 0.965 | 1.86 | -2.91 | 41088 | -- | -- |
| 292.33 | 0.796 | 8.98 | -2.61 | 1.96 | 0.24 | -- | -9.51 | 0.419 | 1.89 | 19.2 | 9239 | -- | -- |
| 363.22 | 0.888 | 8.6 | -0.624 | 1.9 | 1.05 | -- | -- | 0.982 | 1.82 | -1.214 | 40216 | -- | -- |
| 498.53 | 1.05 | 8.5 | 0.15 | -- | -1.73 | -- | -4.3 | 1.56 | -- | 19.2 | 9239 | -- | -- |
| 374.78 | 0.908 | 8.5 | 0.417 | 1.94 | -- | 0.0731 | -- | 1.41 | 1.85 | -- | -- | -- | -- |
| 374.8 | 0.907 | 8.5 | 0.414 | 1.94 | -- | -- | -- | 1.41 | 1.85 | -- | -- | -- | -- |
| 518.54 | 1.07 | 8.41 | 0.877 | -- | -1.93 | -- | -- | 1.77 | -- | 19.2 | 9239 | -- | -- |
| 365.85 | 0.891 | 8.55 | -- | 1.92 | 0.606 | -- | -- | 1.19 | 1.86 | 5.497 | 39433 | -- | -- |
| 602.11 | 1.15 | 8.48 | 0.494 | -- | -- | -- | -- | 1.46 | -- | -- | -- | -- | -- |
| 379.33 | 0.911 | 8.51 | -- | 1.95 | -- | -- | -- | 1.36 | 1.85 | -- | -- | -- | -- |
| 537.93 | 1.08 | 8.44 | -- | -- | -1.74 | -- | -- | 1.64 | -- | 19.2 | 9239 | -- | -- |
| 608.55 | 1.15 | 8.49 | -- | -- | -- | -- | -- | 1.4 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 286.95 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 7 |
| 3 | 287.61 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 8 | 287.93 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 14 | 288.56 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 7 |
| 86 | 292.33 | temperature | 20 | 14400 | > th | dose independent | sin | 12 | NA |
| 124 | 293.67 | temperature | 15 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 131 | 293.95 | temperature | 20 | 14400 | < th | dose independent | sin | 11 | NA |
| 177 | 294.73 | temperature | 20 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 178 | 294.73 | temperature | 20 | 14400 | > th | dose dependent | rect. | 8 | 14 |
| 182 | 294.80 | temperature | 30 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 201 | 294.95 | temperature | 20 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 207 | 295.00 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 246 | 295.29 | temperature | 20 | 14400 | > th | dose dependent | sin | 22 | NA |
| 248 | 295.30 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 320 | 295.68 | temperature | 15 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 377 | 295.97 | temperature | 20 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 644 | 297.24 | temperature | 20 | 14400 | > th | dose dependent | no | NA | NA |
| 674 | 297.35 | temperature | 20 | 14400 | > th | dose dependent | rect. | 19 | 23 |
| 676 | 297.36 | temperature | 20 | 14400 | > th | dose dependent | rect. | 17 | 23 |
| 685 | 297.39 | temperature | 30 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 722 | 297.48 | temperature | 15 | 14400 | > th | dose dependent | rect. | 18 | 20 |
| 737 | 297.51 | temperature | 20 | 14400 | > th | dose dependent | rect. | 13 | 23 |
| 818 | 297.69 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 9 |
| 925 | 297.91 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 10 |