Os10g0516800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Diacylglycerol kinase, catalytic region domain containing protein.
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Os10g0516800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Diacylglycerol kinase, catalytic region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11.43 | 0.159 | 10.7 | 0.745 | 0.608 | -0.554 | -0.285 | 1.38 | 0.211 | 4.43 | 24.93 | 826 | -- | -- |
| 12.33 | 0.164 | 10.7 | 0.531 | 0.624 | -0.445 | -0.3 | -- | 0.213 | 4.5 | 23.14 | 788 | -- | -- |
| 11.64 | 0.159 | 10.7 | 0.76 | 0.611 | -0.552 | -- | 1.46 | 0.211 | 4.48 | 25.02 | 832 | -- | -- |
| 12.32 | 0.163 | 10.7 | 0.486 | 0.614 | -0.404 | -- | -- | 0.14 | 4.6 | 25.25 | 833 | -- | -- |
| 20.24 | 0.21 | 10.7 | 0.847 | -- | -0.958 | -- | 2.06 | 0.293 | -- | 24.12 | 366 | -- | -- |
| 15.96 | 0.187 | 10.8 | 0.393 | 0.697 | -- | -0.222 | -- | 0.112 | 5.25 | -- | -- | -- | -- |
| 16.08 | 0.188 | 10.8 | 0.393 | 0.696 | -- | -- | -- | 0.113 | 5.28 | -- | -- | -- | -- |
| 22.19 | 0.219 | 10.7 | 0.559 | -- | -0.814 | -- | -- | 0.218 | -- | 24.04 | 353 | -- | -- |
| 18.21 | 0.199 | 10.8 | -- | 0.647 | -0.288 | -- | -- | 0.0798 | 4.82 | 25.3 | 820 | -- | -- |
| 41.36 | 0.3 | 10.8 | 0.417 | -- | -- | -- | -- | 0.131 | -- | -- | -- | -- | -- |
| 20.15 | 0.21 | 10.8 | -- | 0.703 | -- | -- | -- | 0.0695 | 5.26 | -- | -- | -- | -- |
| 30.08 | 0.255 | 10.8 | -- | -- | -0.732 | -- | -- | 0.141 | -- | 24.31 | 336 | -- | -- |
| 45.95 | 0.316 | 10.8 | -- | -- | -- | -- | -- | 0.0843 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 11.19 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 10 | 11 |
| 2 | 11.19 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 9 | 13 |
| 7 | 11.30 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 11 | 8 |
| 10 | 11.35 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 9 | 12 |
| 13 | 11.38 | temperature | 20.0 | 720 | > th | dose dependent | sin | 20 | NA |
| 17 | 11.39 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 11 | 8 |
| 21 | 11.39 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 10 | 21 |
| 23 | 11.40 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 19 |
| 81 | 11.50 | temperature | 30.0 | 720 | < th | dose dependent | sin | 21 | NA |
| 85 | 11.50 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 14 |
| 93 | 11.51 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 99 | 11.52 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 115 | 11.54 | temperature | 25.0 | 720 | < th | dose independent | rect. | 8 | 14 |
| 136 | 11.56 | temperature | 10.0 | 720 | > th | dose dependent | sin | 21 | NA |
| 154 | 11.56 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 203 | 11.59 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 235 | 11.62 | temperature | 25.0 | 720 | > th | dose dependent | no | NA | NA |
| 257 | 11.63 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 22 | 23 |
| 267 | 11.64 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 293 | 11.66 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 294 | 11.66 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 329 | 11.69 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 16 | 9 |
| 361 | 11.72 | radiation | 1.0 | 720 | < th | dose dependent | sin | 15 | NA |
| 431 | 11.79 | temperature | 25.0 | 720 | > th | dose independent | rect. | 8 | 13 |
| 445 | 11.81 | radiation | 1.0 | 720 | > th | dose independent | rect. | 16 | 14 |
| 457 | 11.82 | temperature | 25.0 | 720 | < th | dose independent | sin | 21 | NA |
| 474 | 11.84 | radiation | 1.0 | 720 | < th | dose independent | rect. | 16 | 9 |
| 496 | 11.85 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 21 |
| 566 | 11.91 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 594 | 11.93 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 595 | 11.93 | temperature | 25.0 | 270 | < th | dose independent | rect. | 13 | 9 |
| 598 | 11.93 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 604 | 11.94 | temperature | 25.0 | 720 | > th | dose independent | sin | 21 | NA |
| 645 | 11.97 | radiation | 1.0 | 720 | > th | dose independent | sin | 14 | NA |
| 646 | 11.97 | radiation | 1.0 | 720 | > th | dose independent | rect. | 16 | 3 |
| 665 | 11.98 | radiation | 1.0 | 720 | < th | dose independent | sin | 15 | NA |
| 710 | 12.02 | temperature | 25.0 | 720 | > th | dose independent | rect. | 16 | 3 |
| 746 | 12.05 | temperature | 25.0 | 720 | < th | dose independent | rect. | 15 | 5 |
| 749 | 12.05 | temperature | 30.0 | 10 | < th | dose dependent | sin | 16 | NA |
| 773 | 12.07 | temperature | 25.0 | 720 | > th | dose independent | rect. | 11 | 9 |
| 776 | 12.07 | temperature | 30.0 | 90 | < th | dose dependent | sin | 17 | NA |
| 926 | 12.16 | temperature | 25.0 | 720 | < th | dose independent | rect. | 17 | 2 |
| 947 | 12.17 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 984 | 12.20 | temperature | 10.0 | 10 | > th | dose dependent | sin | 17 | NA |