Os10g0515200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os10g0515200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.9 | 0.396 | 9.33 | 1.94 | 1.1 | 1.64 | 0.0457 | -0.615 | 0.401 | 6.74 | 24.6 | 11 | -- | -- |
| 71.51 | 0.397 | 9.34 | 1.86 | 1.1 | 1.69 | 0.0497 | -- | 0.385 | 6.78 | 24.6 | 11 | -- | -- |
| 70.83 | 0.395 | 9.33 | 1.94 | 1.1 | 1.63 | -- | -0.624 | 0.402 | 6.73 | 24.6 | 11 | -- | -- |
| 71.26 | 0.396 | 9.34 | 1.86 | 1.1 | 1.7 | -- | -- | 0.38 | 6.76 | 24.5 | 10 | -- | -- |
| 108.15 | 0.484 | 9.35 | 1.95 | -- | 1.99 | -- | 0.0749 | 0.476 | -- | 29.33 | 316 | -- | -- |
| 113.32 | 0.499 | 9.42 | 1.46 | 1.17 | -- | -0.227 | -- | 0.0754 | 5.71 | -- | -- | -- | -- |
| 113.44 | 0.499 | 9.42 | 1.46 | 1.17 | -- | -- | -- | 0.0765 | 5.74 | -- | -- | -- | -- |
| 107.8 | 0.484 | 9.34 | 2 | -- | 2.08 | -- | -- | 0.522 | -- | 29.28 | 325 | -- | -- |
| 154.08 | 0.581 | 9.42 | -- | 1.14 | 0.992 | -- | -- | 0.0652 | 6.24 | 24.5 | 10 | -- | -- |
| 184.47 | 0.635 | 9.43 | 1.5 | -- | -- | -- | -- | 0.104 | -- | -- | -- | -- | -- |
| 169.87 | 0.61 | 9.45 | -- | 1.19 | -- | -- | -- | -0.0865 | 5.68 | -- | -- | -- | -- |
| 204.8 | 0.667 | 9.42 | -- | -- | 1.42 | -- | -- | 0.173 | -- | 29.9 | 304 | -- | -- |
| 243.81 | 0.729 | 9.47 | -- | -- | -- | -- | -- | -0.0622 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.85 | temperature | 25 | 720 | < th | dose independent | rect. | 10 | 14 |
| 4 | 64.56 | temperature | 25 | 720 | < th | dose independent | sin | 19 | NA |
| 7 | 64.62 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 18 |
| 9 | 64.88 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 18 |
| 14 | 65.33 | temperature | 25 | 10 | < th | dose dependent | sin | 15 | NA |
| 17 | 65.40 | temperature | 25 | 90 | < th | dose dependent | sin | 15 | NA |
| 19 | 65.42 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 18 |
| 46 | 66.17 | temperature | 25 | 720 | > th | dose independent | sin | 19 | NA |
| 71 | 66.53 | temperature | 25 | 720 | > th | dose independent | rect. | 11 | 13 |
| 112 | 67.28 | temperature | 25 | 720 | > th | dose independent | rect. | 13 | 11 |
| 252 | 69.36 | temperature | 20 | 270 | > th | dose dependent | sin | 13 | NA |
| 257 | 69.42 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 8 |
| 292 | 69.87 | temperature | 25 | 10 | < th | dose dependent | rect. | 10 | 22 |
| 325 | 70.30 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 381 | 70.86 | temperature | 15 | 10 | > th | dose dependent | sin | 13 | NA |
| 387 | 70.90 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 10 |
| 396 | 70.95 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 429 | 71.20 | temperature | 20 | 720 | > th | dose dependent | rect. | 11 | 14 |
| 438 | 71.23 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 445 | 71.30 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 455 | 71.40 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 464 | 71.45 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 466 | 71.46 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 489 | 71.63 | temperature | 20 | 720 | > th | dose dependent | sin | 17 | NA |
| 512 | 71.74 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 612 | 72.31 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 719 | 72.99 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 921 | 74.48 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 2 |