Os10g0514600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Clone ZZD584 mRNA sequence.
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Os10g0514600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Clone ZZD584 mRNA sequence.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 137.52 | 0.551 | 2.92 | 0.216 | 0.0817 | 3.08 | -0.182 | 10.7 | 0.149 | 6.86 | 995.1 | 6061 | -- | -- |
| 142.05 | 0.559 | 2.9 | 0.113 | 0.0851 | 0.0315 | -0.16 | -- | 0.134 | 6.91 | 995.1 | 6061 | -- | -- |
| 137.52 | 0.546 | 2.93 | 0.234 | 0.0833 | 3.57 | -- | 12.4 | 0.153 | 7.46 | 995 | 5631 | -- | -- |
| 140.39 | 0.552 | 2.9 | 0.114 | 0.0661 | 0.415 | -- | -- | 0.145 | 6.62 | 997.5 | 5960 | -- | -- |
| 137.75 | 0.547 | 2.93 | 0.279 | -- | 5.08 | -- | 17.6 | 0.152 | -- | 994.9 | 6089 | -- | -- |
| 142.06 | 0.559 | 2.9 | 0.113 | 0.0847 | -- | -0.161 | -- | 0.134 | 6.91 | -- | -- | -- | -- |
| 142.11 | 0.558 | 2.9 | 0.111 | 0.0848 | -- | -- | -- | 0.134 | 7.56 | -- | -- | -- | -- |
| 140.68 | 0.552 | 2.9 | 0.109 | -- | 0.447 | -- | -- | 0.155 | -- | 997.6 | 5831 | -- | -- |
| 140.64 | 0.552 | 2.9 | -- | 0.0799 | 0.446 | -- | -- | 0.143 | 7.3 | 997.7 | 5843 | -- | -- |
| 142.5 | 0.558 | 2.9 | 0.112 | -- | -- | -- | -- | 0.136 | -- | -- | -- | -- | -- |
| 142.43 | 0.558 | 2.9 | -- | 0.0857 | -- | -- | -- | 0.122 | 7.47 | -- | -- | -- | -- |
| 140.99 | 0.553 | 2.9 | -- | -- | 0.447 | -- | -- | 0.143 | -- | 997.7 | 5843 | -- | -- |
| 142.83 | 0.558 | 2.9 | -- | -- | -- | -- | -- | 0.123 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.40 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 23 | 1 |
| 16 | 131.95 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 4 | 10 |
| 18 | 132.16 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 36 | 132.30 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 2 | 12 |
| 38 | 132.33 | atmosphere | 995.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 50 | 132.45 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 8 | 6 |
| 55 | 132.59 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 100 | 133.10 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 173 | 133.78 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 12 | 9 |
| 181 | 133.89 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 213 | 134.32 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 219 | 134.37 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 251 | 134.49 | radiation | 10.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 253 | 134.51 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 19 | 19 |
| 266 | 134.82 | wind | 1.0 | 270 | < th | dose dependent | rect. | 20 | 1 |
| 277 | 135.25 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 4 | 3 |
| 280 | 135.32 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 20 | 5 |
| 294 | 135.52 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 309 | 135.81 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 7 |
| 317 | 135.93 | wind | 1.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 319 | 135.95 | wind | 1.0 | 270 | < th | dose independent | rect. | 20 | 1 |
| 331 | 136.12 | wind | 7.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 333 | 136.13 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 354 | 136.26 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 366 | 136.30 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 373 | 136.44 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 396 | 136.71 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 417 | 136.88 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 10 | 15 |
| 422 | 136.94 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 4 |
| 430 | 137.00 | wind | 3.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 431 | 137.00 | wind | 7.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 438 | 137.08 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 458 | 137.23 | temperature | 25.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 469 | 137.30 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 476 | 137.40 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 23 | 14 |
| 506 | 137.60 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 542 | 137.85 | atmosphere | 1000.0 | 90 | > th | dose independent | sin | 13 | NA |
| 552 | 137.90 | atmosphere | 1000.0 | 90 | < th | dose independent | sin | 13 | NA |
| 565 | 137.95 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 566 | 137.96 | humidity | 90.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 573 | 137.98 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 577 | 137.98 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 581 | 137.98 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 586 | 137.98 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 587 | 137.98 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 589 | 137.98 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 595 | 137.99 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 1 | 3 |
| 604 | 138.01 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 20 | 17 |
| 619 | 138.05 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 629 | 138.07 | wind | 5.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 632 | 138.07 | temperature | 10.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 635 | 138.07 | temperature | 30.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 636 | 138.07 | humidity | 50.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 644 | 138.07 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 1 |
| 649 | 138.07 | temperature | 10.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 651 | 138.07 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 659 | 138.09 | atmosphere | 1000.0 | 10 | > th | dose independent | sin | 12 | NA |
| 685 | 138.13 | radiation | 1.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 760 | 138.34 | radiation | 20.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 763 | 138.35 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 781 | 138.41 | wind | 9.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 801 | 138.46 | wind | 9.0 | 30 | < th | dose independent | rect. | 7 | 23 |
| 847 | 138.57 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 875 | 138.61 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 922 | 138.67 | atmosphere | 995.0 | 4320 | > th | dose independent | sin | 7 | NA |
| 942 | 138.69 | atmosphere | 995.0 | 4320 | < th | dose dependent | sin | 5 | NA |
| 964 | 138.73 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 966 | 138.74 | wind | 9.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 971 | 138.74 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 985 | 138.77 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 24 | 1 |