Os10g0511900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0511900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.29 | 0.245 | 11.1 | 1.88 | 0.508 | -0.271 | -0.0561 | 1.6 | 0.523 | 4.18 | 21.33 | 2185 | -- | -- |
| 28.9 | 0.25 | 11.2 | 1.74 | 0.524 | -0.711 | 0.036 | -- | 0.467 | 4.25 | 15.3 | 23653 | -- | -- |
| 27.29 | 0.243 | 11.1 | 1.88 | 0.507 | -0.27 | -- | 1.59 | 0.522 | 4.2 | 21.33 | 2143 | -- | -- |
| 28.73 | 0.25 | 11.2 | 1.81 | 0.507 | -0.702 | -- | -- | 0.465 | 4.15 | 15.29 | 23777 | -- | -- |
| 40.71 | 0.297 | 11.1 | 1.91 | -- | -0.279 | -- | 1.57 | 0.542 | -- | 21.6 | 1882 | -- | -- |
| 37.06 | 0.285 | 11.2 | 1.28 | 0.495 | -- | 0.024 | -- | 0.313 | 4.35 | -- | -- | -- | -- |
| 37.06 | 0.285 | 11.2 | 1.28 | 0.495 | -- | -- | -- | 0.313 | 4.35 | -- | -- | -- | -- |
| 41.97 | 0.302 | 11.2 | 1.84 | -- | -0.73 | -- | -- | 0.487 | -- | 15.2 | 23632 | -- | -- |
| 53.11 | 0.339 | 11.3 | -- | 0.472 | 0.835 | -- | -- | -0.0751 | 5.19 | 21.76 | 47520 | -- | -- |
| 50.25 | 0.331 | 11.2 | 1.3 | -- | -- | -- | -- | 0.326 | -- | -- | -- | -- | -- |
| 80.42 | 0.419 | 11.2 | -- | 0.52 | -- | -- | -- | 0.17 | 4.3 | -- | -- | -- | -- |
| 64.89 | 0.375 | 11.3 | -- | -- | 0.804 | -- | -- | -0.099 | -- | 22.03 | 47520 | -- | -- |
| 94.98 | 0.455 | 11.3 | -- | -- | -- | -- | -- | 0.181 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.81 | humidity | 90 | 14400 | > th | dose independent | rect. | 20 | 5 |
| 3 | 25.83 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 8 |
| 11 | 25.90 | humidity | 90 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 14 | 25.91 | humidity | 90 | 14400 | < th | dose independent | rect. | 17 | 11 |
| 18 | 25.94 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 6 |
| 24 | 25.97 | humidity | 90 | 14400 | > th | dose independent | sin | 13 | NA |
| 32 | 26.00 | humidity | 90 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 39 | 26.03 | humidity | 90 | 14400 | < th | dose independent | rect. | 17 | 14 |
| 44 | 26.05 | humidity | 90 | 14400 | < th | dose independent | sin | 13 | NA |
| 68 | 26.12 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 114 | 26.23 | humidity | 80 | 14400 | > th | dose dependent | rect. | 17 | 12 |
| 189 | 26.41 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 194 | 26.42 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 4 |
| 219 | 26.48 | humidity | 80 | 14400 | > th | dose dependent | rect. | 14 | 15 |
| 222 | 26.49 | humidity | 80 | 14400 | > th | dose dependent | sin | 12 | NA |
| 224 | 26.49 | humidity | 80 | 14400 | > th | dose dependent | rect. | 20 | 7 |
| 272 | 26.60 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 303 | 26.65 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 312 | 26.66 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 355 | 26.76 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 453 | 26.90 | temperature | 15 | 720 | > th | dose dependent | sin | 11 | NA |
| 560 | 27.04 | humidity | 90 | 14400 | > th | dose independent | no | NA | NA |
| 590 | 27.08 | humidity | 90 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 596 | 27.09 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 610 | 27.10 | humidity | 90 | 14400 | < th | dose independent | no | NA | NA |
| 633 | 27.12 | humidity | 80 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 634 | 27.12 | humidity | 90 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 635 | 27.12 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 661 | 27.14 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 672 | 27.14 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 13 | 3 |
| 676 | 27.15 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 14 |
| 679 | 27.15 | humidity | 90 | 14400 | > th | dose independent | rect. | 3 | 23 |
| 680 | 27.15 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 23 |
| 707 | 27.17 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 720 | 27.18 | humidity | 80 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 729 | 27.19 | humidity | 80 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 748 | 27.20 | humidity | 80 | 14400 | > th | dose dependent | rect. | 17 | 22 |
| 764 | 27.22 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 23 |
| 786 | 27.23 | humidity | 80 | 14400 | > th | dose dependent | rect. | 21 | 18 |
| 804 | 27.25 | humidity | 80 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 819 | 27.26 | humidity | 80 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 870 | 27.29 | humidity | 80 | 14400 | > th | dose dependent | rect. | 21 | 22 |
| 897 | 27.31 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 11 | 8 |
| 940 | 27.34 | humidity | 80 | 14400 | > th | dose dependent | no | NA | NA |
| 965 | 27.36 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |