Os10g0509900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os10g0509900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 354.94 | 0.885 | 2.94 | -0.0714 | 0.00966 | 1.44 | 0.681 | -17.1 | 0.0553 | 17.3 | 3.701 | 333 | 5.04 | 2.06 |
| 371.02 | 0.897 | 2.95 | -0.0345 | 0.0083 | 4.57 | 0.432 | -- | 0.0545 | 17 | 4.6 | 328 | 4.76 | 1.27 |
| 355.87 | 0.879 | 2.94 | -0.072 | 0.0257 | 1.46 | -- | -17.4 | 0.0638 | 16.5 | 3.712 | 332 | 5 | 2.1 |
| 371.7 | 0.898 | 2.95 | -0.0193 | 0.0383 | 4.54 | -- | -- | 0.036 | 14.3 | 4.602 | 331 | 4.71 | 1.3 |
| 355.88 | 0.879 | 2.94 | -0.0738 | -- | 1.4 | -- | -17.6 | 0.0582 | -- | 3.728 | 332 | 4.99 | 2.1 |
| 426.49 | 0.968 | 2.96 | -0.108 | 0.106 | -- | -1.42 | -- | -0.0201 | 7.63 | -- | -- | -- | -- |
| 432.07 | 0.973 | 2.96 | -0.141 | 0.109 | -- | -- | -- | -0.0172 | 8.9 | -- | -- | -- | -- |
| 371.79 | 0.898 | 2.95 | -0.0205 | -- | 4.54 | -- | -- | 0.0351 | -- | 4.605 | 331 | 4.71 | 1.29 |
| 371.71 | 0.898 | 2.95 | -- | 0.0386 | 4.55 | -- | -- | 0.0382 | 14.4 | 4.616 | 331 | 4.7 | 1.28 |
| 432.75 | 0.972 | 2.97 | -0.141 | -- | -- | -- | -- | -0.0165 | -- | -- | -- | -- | -- |
| 432.6 | 0.973 | 2.96 | -- | 0.108 | -- | -- | -- | -0.00149 | 9 | -- | -- | -- | -- |
| 371.8 | 0.898 | 2.95 | -- | -- | 4.55 | -- | -- | 0.0374 | -- | 4.728 | 333 | 4.7 | 1.27 |
| 433.27 | 0.972 | 2.96 | -- | -- | -- | -- | -- | -0.000797 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 370.28 | wind | 3.0 | 270 | > th | dose dependent | rect. | 5 | 2 |
| 2 | 371.91 | wind | 5.0 | 90 | > th | dose dependent | rect. | 4 | 5 |
| 3 | 372.94 | wind | 3.0 | 270 | > th | dose independent | rect. | 5 | 2 |
| 5 | 377.54 | wind | 7.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 10 | 379.99 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 5 | 1 |
| 11 | 379.99 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 33 | 387.25 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 7 |
| 34 | 387.25 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 7 |
| 40 | 388.23 | wind | 7.0 | 90 | > th | dose independent | rect. | 7 | 2 |
| 110 | 393.58 | wind | 5.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 114 | 393.58 | wind | 5.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 126 | 393.88 | wind | 5.0 | 720 | > th | dose dependent | rect. | 22 | 8 |
| 128 | 393.95 | wind | 7.0 | 720 | > th | dose independent | rect. | 22 | 7 |
| 132 | 394.01 | humidity | 90.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 148 | 394.40 | wind | 9.0 | 720 | > th | dose independent | rect. | 22 | 1 |
| 152 | 394.40 | wind | 9.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 166 | 394.86 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 276 | 396.80 | wind | 5.0 | 720 | < th | dose independent | rect. | 22 | 9 |
| 323 | 397.73 | wind | 9.0 | 90 | > th | dose dependent | rect. | 21 | 13 |
| 324 | 397.73 | wind | 9.0 | 90 | > th | dose dependent | rect. | 19 | 15 |
| 582 | 401.60 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 13 |
| 659 | 402.53 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 18 |
| 702 | 402.98 | wind | 7.0 | 720 | < th | dose dependent | rect. | 22 | 10 |
| 724 | 403.20 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 15 |
| 730 | 403.28 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 12 |
| 765 | 403.50 | wind | 7.0 | 720 | < th | dose dependent | rect. | 1 | 7 |
| 773 | 403.62 | precipitation | 0.1 | 270 | < th | dose independent | sin | 7 | NA |
| 774 | 403.62 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 7 | NA |
| 776 | 403.65 | precipitation | 0.1 | 270 | > th | dose independent | sin | 7 | NA |
| 791 | 403.78 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 13 |
| 796 | 403.78 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 13 |
| 821 | 403.97 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 822 | 403.97 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 846 | 404.19 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 15 |
| 857 | 404.23 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 7 | NA |
| 867 | 404.28 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 13 |
| 878 | 404.31 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 4 |
| 891 | 404.31 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 4 | 4 |
| 917 | 404.34 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 2 |
| 924 | 404.34 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 979 | 404.44 | wind | 3.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 998 | 404.52 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 19 |