Os10g0509800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0509800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 157.29 | 0.589 | 5.97 | 0.411 | 1.97 | 0.727 | 1.06 | 4.58 | -0.12 | 18 | 993.6 | 18569 | -- | -- |
| 178.73 | 0.623 | 5.87 | 1.18 | 1.99 | 1.23 | 1.07 | -- | 0.078 | 18 | 975.3 | 13587 | -- | -- |
| 159.99 | 0.589 | 5.97 | 0.396 | 1.98 | 0.729 | -- | 4.6 | -0.115 | 18 | 992.1 | 18452 | -- | -- |
| 181.57 | 0.628 | 5.87 | 1.17 | 1.99 | 1.24 | -- | -- | 0.0863 | 18 | 977 | 13561 | -- | -- |
| 362.86 | 0.887 | 5.92 | 0.294 | -- | 0.804 | -- | 4.67 | -0.14 | -- | 987 | 17049 | -- | -- |
| 207.52 | 0.675 | 5.88 | 0.892 | 1.97 | -- | 1.06 | -- | 0.029 | 18 | -- | -- | -- | -- |
| 210.26 | 0.679 | 5.88 | 0.882 | 1.98 | -- | -- | -- | 0.0328 | 18 | -- | -- | -- | -- |
| 385.61 | 0.915 | 5.83 | 1.12 | -- | 1.2 | -- | -- | 0.0517 | -- | 982.8 | 14104 | -- | -- |
| 215.15 | 0.683 | 5.9 | -- | 1.97 | 0.88 | -- | -- | -0.0532 | 18 | 976.2 | 13402 | -- | -- |
| 413.23 | 0.95 | 5.85 | 0.825 | -- | -- | -- | -- | -0.0121 | -- | -- | -- | -- | -- |
| 230.76 | 0.711 | 5.9 | -- | 1.97 | -- | -- | -- | -0.0655 | 18.1 | -- | -- | -- | -- |
| 415.6 | 0.949 | 5.87 | -- | -- | 0.882 | -- | -- | -0.103 | -- | 994.8 | 12693 | -- | -- |
| 431.16 | 0.969 | 5.87 | -- | -- | -- | -- | -- | -0.104 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 156.29 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 156.39 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 3 | 156.39 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 4 | 156.48 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 5 | 160.98 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 7 | 161.04 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 14 | 161.33 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 16 | 161.38 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 35 | 161.71 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 39 | 161.74 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 87 | 161.97 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 5 | 19 |
| 89 | 161.98 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 20 | 15 |
| 91 | 161.98 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 5 | 19 |
| 97 | 161.99 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 20 | 14 |
| 132 | 162.03 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 133 | 162.03 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 5 | 11 |
| 138 | 162.04 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 193 | 162.07 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 20 | 20 |
| 236 | 162.09 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 20 | 20 |
| 349 | 162.15 | atmosphere | 995.0 | 14400 | > th | dose dependent | sin | 2 | NA |
| 384 | 162.16 | atmosphere | 995.0 | 14400 | > th | dose dependent | no | NA | NA |
| 385 | 162.16 | atmosphere | 1015.0 | 14400 | < th | dose dependent | sin | 7 | NA |
| 386 | 162.16 | atmosphere | 1015.0 | 14400 | < th | dose dependent | sin | 2 | NA |
| 449 | 162.18 | atmosphere | 1015.0 | 14400 | < th | dose dependent | no | NA | NA |
| 450 | 162.18 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 490 | 162.19 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 9 | 23 |
| 540 | 162.21 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 9 | 23 |
| 837 | 162.37 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 936 | 162.45 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 949 | 162.46 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |