Os10g0508900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0508900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 254.07 | 0.749 | 5.48 | -0.89 | 0.948 | -2.09 | -5.74 | 0.346 | -0.488 | 18.8 | 17.95 | 6629 | -- | -- |
| 254.19 | 0.743 | 5.5 | -0.979 | 0.941 | -2.08 | -5.76 | -- | -0.526 | 18.8 | 17.9 | 6608 | -- | -- |
| 337.44 | 0.856 | 5.49 | -0.845 | 0.969 | -2.07 | -- | 0.211 | -0.519 | 18.3 | 18.1 | 6484 | -- | -- |
| 337.41 | 0.856 | 5.5 | -0.889 | 0.957 | -2.1 | -- | -- | -0.542 | 18.3 | 17.7 | 6509 | -- | -- |
| 377.28 | 0.905 | 5.45 | -0.738 | -- | -2.11 | -- | 0.444 | -0.455 | -- | 17.6 | 7107 | -- | -- |
| 364.16 | 0.895 | 5.63 | -2.12 | 0.921 | -- | -5.74 | -- | -1.12 | 18.7 | -- | -- | -- | -- |
| 445.1 | 0.988 | 5.64 | -2.02 | 0.934 | -- | -- | -- | -1.14 | 17.9 | -- | -- | -- | -- |
| 377.41 | 0.905 | 5.47 | -0.856 | -- | -2.15 | -- | -- | -0.487 | -- | 17.3 | 7099 | -- | -- |
| 351.58 | 0.873 | 5.44 | -- | 0.942 | -2.68 | -- | -- | -0.281 | 18.1 | 15.92 | 7334 | -- | -- |
| 490.34 | 1.03 | 5.62 | -2.05 | -- | -- | -- | -- | -1.16 | -- | -- | -- | -- | -- |
| 552.91 | 1.1 | 5.58 | -- | 0.966 | -- | -- | -- | -0.911 | 17.8 | -- | -- | -- | -- |
| 390.13 | 0.92 | 5.43 | -- | -- | -2.77 | -- | -- | -0.31 | -- | 15.1 | 7114 | -- | -- |
| 601.3 | 1.14 | 5.57 | -- | -- | -- | -- | -- | -0.931 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 250.51 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 34 | 253.32 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 4 |
| 42 | 253.71 | temperature | 20 | 4320 | > th | dose dependent | rect. | 22 | 11 |
| 52 | 253.94 | temperature | 25 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 85 | 254.99 | temperature | 20 | 4320 | > th | dose dependent | sin | 10 | NA |
| 86 | 254.99 | temperature | 25 | 4320 | > th | dose dependent | rect. | 2 | 10 |
| 98 | 255.23 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 159 | 256.62 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 198 | 257.46 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 208 | 257.57 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 2 |
| 211 | 257.63 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 5 |
| 453 | 259.36 | temperature | 20 | 14400 | > th | dose independent | rect. | 3 | 2 |
| 500 | 259.60 | temperature | 20 | 14400 | < th | dose independent | rect. | 3 | 2 |
| 570 | 259.97 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 15 |
| 669 | 260.37 | temperature | 30 | 4320 | < th | dose dependent | sin | 12 | NA |
| 698 | 260.45 | temperature | 20 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 724 | 260.53 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 878 | 261.09 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 883 | 261.11 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 23 |
| 900 | 261.20 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 946 | 261.34 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |